acedb (4.9.39+dfsg.02-9) unstable; urgency=medium [ Olivier Gayot ] * Build against glibc 2.38 Closes: #1056591 (LP: #2044385) [ Andreas Tille ] Rely on pre-initialized dpkg-architecture variables. -- Andreas Tille Fri, 24 Nov 2023 19:48:00 +0100 acedb (4.9.39+dfsg.02-8) unstable; urgency=medium [ Étienne Mollier ] * Adjust hardening.patch to inject CPPFLAGS too, plus more LDFLAGS. * Refresh no_dotter_and_belvu.patch accordingly. [ Andreas Tille ] * Drop transitional package acedb-other-belvu Closes: #1032625 * Drop transitional package acedb-other-dotter Closes: #1032626 * Build only efetch which does not depend on GTK+2 which will be removed from Debian Closes: #967243 * Lintian-overrides for false positives about JS in html doc (See lintian bug #1017966) * Standards-Version: 4.6.2 (routine-update) -- Andreas Tille Tue, 15 Aug 2023 16:23:13 +0200 acedb (4.9.39+dfsg.02-7) unstable; urgency=medium * Team upload. * Make glibc2.32.patch header description coherent. * Fix FTBFS on !amd64 architectures: + Review hardening.patch to propagate flags on !amd64 architectures. + Move linker option -ltirpc from glibc2.32.patch to d/rules. -- Étienne Mollier Mon, 25 Oct 2021 21:40:12 +0200 acedb (4.9.39+dfsg.02-6) unstable; urgency=medium * Team upload. * d/{control,rules}: make use of tirpc for rpc/rpc.h. * Add glibc2.32.patch to fix failur to build from source. (Closes: #997105) * Standards-Version: 4.6.0 (routine-update) -- Étienne Mollier Sun, 24 Oct 2021 23:33:03 +0200 acedb (4.9.39+dfsg.02-5) unstable; urgency=medium * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * No tab in license text (routine-update) * Set field Upstream-Name in debian/copyright. * Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright). * dh_missing --list-missing -- Andreas Tille Fri, 27 Nov 2020 20:24:00 +0100 acedb (4.9.39+dfsg.02-4) unstable; urgency=medium [ Jelmer Vernooij ] * Trim trailing whitespace. [ Andreas Tille ] * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * Remove trailing whitespace in debian/copyright -- Andreas Tille Fri, 26 Oct 2018 16:08:53 +0200 acedb (4.9.39+dfsg.02-3) unstable; urgency=medium [ Adrian Bunk ] * Fix with shared libfl needless linking Closes: #891529 [ Andreas Tille ] * Standards-Version: 4.1.3 * Do not create empty directories * Drop outdated text from README.Debian -- Andreas Tille Wed, 28 Feb 2018 11:11:58 +0100 acedb (4.9.39+dfsg.02-2) unstable; urgency=medium [ Steffen Moeller ] * debian/upstream/metadata: - Added references to registries - yamllint cleanliness [ Andreas Tille ] * Package acedb-other-dotter and acedb-other-belvu are now transitional packages to install dotter and belvu from seqtools source package * Reflect removal of dotter and belvu in README.Debian * Standards-Version: 4.1.2 -- Andreas Tille Tue, 19 Dec 2017 13:19:42 +0100 acedb (4.9.39+dfsg.02-1) unstable; urgency=medium * Convert packaging from SVN to Git * cme fix dpkg-control * Fix watch file * Use Files-Excluded rather than text in README.source * debhelper 10 * Build-Depends: libfl-dev Closes: #846414 * hardening=+all -- Andreas Tille Sat, 03 Dec 2016 18:13:36 +0100 acedb (4.9.39+dfsg.01-6) unstable; urgency=low [ Charles Plessy ] * Renamed debian/upstream-metadata.yaml to debian/upstream/metadata [ Andreas Tille ] * debian/upstream: Mark original citation as specific for package acedb-other-dotter and add general citation for AceDB * Add remark about "AceDB@NCBI" in README.Debian * Marked watch file as non-functional * cme fix dpkg-control * Priority: optional * debhelper 9 * cme fix dpkg-copyright * short dh rules file * DEP3 * fix typo in d/copyright * run upstream test suite at build time to have some log but ignore errors since not all needed functions that are used in the test suite are available * Propagate hardening options * Fix Mayhem bugs Closes: #715832, #715860 -- Andreas Tille Sun, 13 Dec 2015 19:01:45 +0100 acedb (4.9.39+dfsg.01-5) unstable; urgency=low [ DMPT ] [Thorsten Alteholz] * debian/rules: get-orig-source moves target into ../tarballs [ A. Costa ] * debian/efetch.1: typo correction (Closes: #650471). [ Andreas Tille ] * debian/efetch.1: Remove remark about popcon which is not relevant for a manpage -- Andreas Tille Sat, 24 Dec 2011 08:38:00 +0100 acedb (4.9.39+dfsg.01-4) unstable; urgency=low * debian/patches/no-curses.patch: Do not build against ncurses Closes: #646133 -- Andreas Tille Fri, 21 Oct 2011 21:58:00 +0200 acedb (4.9.39+dfsg.01-3) unstable; urgency=low * Build-Depends: libreadline-dev (instead of libreadline5-dev) Closes: #634442 * Standards-Version: 3.9.2 (no changes needed) * Debhelper 8 (control+compat) * Fixed Vcs fields -- Andreas Tille Tue, 19 Jul 2011 08:16:10 +0200 acedb (4.9.39+dfsg.01-2) unstable; urgency=low * Applied Ubuntu patch to Debian packaging (thanks to Fabrice Coutadeur) Closes: #615690 * debian/watch: mangle version with dfsg -- Andreas Tille Mon, 28 Feb 2011 08:25:33 +0100 acedb (4.9.39+dfsg.01-1ubuntu1) natty; urgency=low * binutils-gold.patch: patch wmake/LINUX_64_DEF and wmake/LINUX_$_DEF to add explicit link with libX11. This fixes a FTBFS with binutils-gold. -- Fabrice Coutadeur Fri, 05 Nov 2010 06:09:02 +0000 acedb (4.9.39+dfsg.01-1) unstable; urgency=low * Corrected for rfc files had somehow sneaked into the uploaded source tree (Closes: #591506) * Added get-orig-source target to debian/rules automating the clensing. -- Steffen Moeller Mon, 09 Aug 2010 21:45:21 +0200 acedb (4.9.39-3) unstable; urgency=low [Andreas Tille] * Group maintenance, added myself to uploaders * Somebody has provided upstream-metadata.yaml, just mention this in changelog * Standards-Version: 3.9.1 (no changes needed) * Build-Depends: pkg-config, csh Closes: #589065 Remark: Better than Build-Depending csh would be to port the scripts in w3rdparty to POSIX * Added other missing Build-Depends: flex, bison * debian/source/format: 3.0 (quilt) -- Andreas Tille Mon, 09 Aug 2010 17:10:08 +0200 acedb (4.9.39-2) unstable; urgency=low * Cleanups in debian/copyright reaction to previous rejection (Closes: #542068) * Completed man pages - by adding --help as an acceptable argument - with the help of help2man and some - considerable manual editing -- Steffen Moeller Sun, 11 Jul 2010 06:27:12 +0200 acedb (4.9.39-1) experimental; urgency=low * A first part of ACEDB is packaged - the belvu alignment viewer - the dotter pairwise alignment viewer - the efetch tool to retrieve sequences * No extra effort like for man pages invested -- Steffen Moeller Mon, 17 Aug 2009 14:39:57 +0200