avogadrolibs (1.97.0-3) unstable; urgency=medium * deactivate VTK support as recommended by upstream (VTK support is not yet stable) * install static plugin libraries to the development package, not the binary package. Closes: #1022755. -- Drew Parsons Tue, 08 Nov 2022 10:38:05 +0100 avogadrolibs (1.97.0-2) unstable; urgency=medium * debian patch fix_mouse_scroll_PR1065.patch applies upstream PR#1065 to fix mouse button scrolling -- Drew Parsons Fri, 29 Jul 2022 23:57:05 +0200 avogadrolibs (1.97.0-1) unstable; urgency=medium * New upstream release. * activate VTK support - Build-Depends: libvtk9-qt-dev - debian patch manage_vtk.patch switches off plotxrd plugin (GenXrdPattern is not yet available for Debian) * update debian patch script_hashbang.patch adding scriptfileformats/formatScripts/zyx.py and antechamber.py * debian/tests: add OPENGL (rendering) tests (no need for VTK tests since qtopengl tests are not active) -- Drew Parsons Thu, 28 Jul 2022 22:08:29 +0200 avogadrolibs (1.96.0-2) unstable; urgency=medium * reinstate debian patch use_overlayaxes.patch to allow build with OpenGL on armel, armhf. The problem is Qt with OpenGL, not OpenGL in general, so add control flag USE_QT_OPENGL=OFF rather than USE_OPENGL=OFF, which would deactivate all OpenGL not just the problematic overlayaxes plugin. -- Drew Parsons Fri, 03 Jun 2022 23:40:22 +0200 avogadrolibs (1.96.0-1) unstable; urgency=medium * New upstream release. - applies debian patches: fix_bond_centric_and_manipulator_tool.patch memory_crystal_PR876.patch nolayer_PR806.patch test_mostly_zero.patch use_overlayaxes.patch * Standards-Version: 4.6.1 -- Drew Parsons Fri, 03 Jun 2022 19:51:51 +0200 avogadrolibs (1.95.1-9) unstable; urgency=medium * add debian patches - memory_crystal_PR876.patch applies upstream PR876 to fix memory crash building crystal supercells. - doc_mathjax.patch configures docs to use local mathjax * fix python installation to use standard python3 location -- Drew Parsons Fri, 29 Apr 2022 23:25:31 +0200 avogadrolibs (1.95.1-8) unstable; urgency=medium * Team upload. * debian/patches/fix_bond_centric_and_manipulator_tool.patch: Add missing upstream commit c47d00c to patch, thanks to Aritz Erkiaga. -- Michael Banck Sat, 26 Feb 2022 14:15:45 +0100 avogadrolibs (1.95.1-7) unstable; urgency=medium * Team upload. * debian/patches/fix_bond_centric_and_manipulator_tool.patch: New patch, fixes the bond centric and manipulation tools, taken from upstream commits 15fe8df and 64f62a4 from pull request #825 and thanks to Aritz Erkiaga. Closes: #1005006, #1006184. -- Michael Banck Fri, 25 Feb 2022 08:07:31 +0100 avogadrolibs (1.95.1-6) unstable; urgency=medium * revert Build-Depends: python3:any | ... dh-sequence-python3 from 1.95.1-1. The lintian error was incorrect, see Bug#995981. Build with default python only since build uses cmake not pybuild. Closes: #998469. -- Drew Parsons Thu, 25 Nov 2021 13:07:01 +0100 avogadrolibs (1.95.1-5) unstable; urgency=medium * add molequeue support - adds quantum chemical input support (cp2k, gamess) - drop debian patch drop_cp2kinput.patch - Build-Depends: molequeue, libmolequeue-dev, libavogadro2-1 Recommends: molequeue. molequeue is used by libAvogadroMoleQueue.so.1 when available, avogadrolibs tests use libmolequeue-dev for molequeue cmake scripts - debian patch molequeue_system.patch builds against system molequeue instead of vendored molequeue client headers. * add qtgui tests in debian/tests - debian patch fix_test_qtgui.patch fixes linked libraries in tests/qtgui -- Drew Parsons Fri, 15 Oct 2021 22:42:02 +0200 avogadrolibs (1.95.1-4) unstable; urgency=medium * debian patch test_mostly_zero.patch tests ">=0" within machine precision, i.e. ">=-EPS". Required for i386 to pass UnitCellTest.wrapAtomsToUnitCell, see upstream Issue #812. -- Drew Parsons Sun, 10 Oct 2021 18:32:36 +0200 avogadrolibs (1.95.1-3) unstable; urgency=medium * debian patch use_overlayaxes.patch skips the overlayaxes plugin on armel,armhf. Qt/GL support is broken on armel,armhf, see Bug#798408 and the problem is triggered by the overlayaxes plugin. -- Drew Parsons Sat, 09 Oct 2021 03:01:34 +0200 avogadrolibs (1.95.1-2) unstable; urgency=medium * debian patch nolayer_PR806.patch applies upstream PR#806 to fix handling molecules with no layers. Intended to fix spglib segfault (upstream Issue#752) -- Drew Parsons Tue, 05 Oct 2021 11:53:07 +0200 avogadrolibs (1.95.1-1) unstable; urgency=medium * New upstream release. - applies debian patches fix_SMILES_PR661.patch fix_transparency_PR656.patch insert_crystals_PR658.patch insert_crystals_PR659.patch read_nonstandard_pdb_PR647.patch * Standards-Version: 4.6.0 * Build-Depends: python3:any | python3-all:any | python3-dev:any | python3-all-dev:any | dh-sequence-python3. For lintian warning missing-build-dependency-for-dh-addon * download libavogadro2-1 Depends to Recommends: python3:any -- Drew Parsons Mon, 04 Oct 2021 16:14:46 +0200 avogadrolibs (1.94.0-6) experimental; urgency=medium * debian patches insert_crystals_PR658.patch and insert_crystals_PR659.patch apply upstream PR#658 and PR#659 to activate Insert Fragment for crystals. * debian patch fix_SMILES_PR661.patch fixes random failure to insert SMILES molecules. Note 'H' is not supported in the SMILES format. -- Drew Parsons Fri, 09 Jul 2021 18:24:16 +0200 avogadrolibs (1.94.0-5) experimental; urgency=medium * debian patch read_nonstandard_pdb_PR647.patch applies upstream PR#646 allowing nonstandard pdb files to be read. -- Drew Parsons Fri, 09 Jul 2021 00:45:47 +0200 avogadrolibs (1.94.0-4) experimental; urgency=medium * debian patch fix_transparency_PR656.patch applies upstream PR#656 to fix transparency of selections. * reinstate debian/tmp/html in debian/not-installed. It's installed by dh_installdocs not dh_install, dh_missing does not know about doc installations. -- Drew Parsons Thu, 08 Jul 2021 20:59:47 +0200 avogadrolibs (1.94.0-3) experimental; urgency=medium * libavogadro-data: install molecules and crystals data directly from source in debian/data to enable arch-indep builds -- Drew Parsons Tue, 06 Jul 2021 18:49:26 +0200 avogadrolibs (1.94.0-2) experimental; urgency=medium * libavogadro-dev Depends: libglvnd-dev Needed to provide libOpenGL.so (libopengl-dev) and other INTERFACE_LINK_LIBRARIES listed in cmake config scripts. -- Drew Parsons Tue, 06 Jul 2021 17:47:53 +0200 avogadrolibs (1.94.0-1) experimental; urgency=medium * New upstream release. - Build-Depends: python3-skbuild, python3-wheel, libqt5svg5-dev - applies debian patches export_molecule_save_68fb007.patch, fix_spglib_include_path.patch, patch_version_1.93.1.patch * Build-Depends: libjs-mathjax. Use local copy of mathjax.js in docs. * libavogadro-data package provides molecules and crystals for the insertfragment plugin - provided in source as git subtrees in debian/data. - debian patch qtplugins_insertfragment.patch enables build access * libavogadro2-1 Recommends: python3-cclib (used by formatScripts/cclibScript.py) -- Drew Parsons Tue, 29 Jun 2021 03:32:59 +0200 avogadrolibs (1.93.1-3) unstable; urgency=medium * debian patch export_molecule_save_68fb007.patch applies upstream commit 68fb007 (PR#517) to fix the Save dialog when exporting molecules (upstream issue #439). -- Drew Parsons Wed, 14 Apr 2021 22:48:26 +0200 avogadrolibs (1.93.1-2) unstable; urgency=medium * bring new upstream release into bullseye -- Drew Parsons Sat, 27 Feb 2021 19:04:09 +0100 avogadrolibs (1.93.1-1) experimental; urgency=medium * New upstream release. * debian patch patch_version_1.93.1.patch fixes upstream CMakeLists.txt to register version as 1.93.1 not 1.93.0. -- Drew Parsons Thu, 25 Feb 2021 18:23:37 +0100 avogadrolibs (1.93.0+git20201104.926573b-1) unstable; urgency=medium * New upstream snapshot. * Standards-Version: 4.5.1 * use help2man to generate man pages for avobabel and qube (help2man -N -n "utility for Avogadro2" -S Avogadro2 --version-string='\0' avobabel > avobabel.1) -- Drew Parsons Sun, 03 Jan 2021 01:33:43 +1100 avogadrolibs (1.93.0+git20200509.e169315-1) unstable; urgency=medium * New upstream snapshot - fixes H atom handling during geometry optimization. - supports Python3 (drop debian patch build_python3.patch) * mark libavogadro-dev as Multi-Arch: same * add debian patches: - drop_cp2kinput.patch drops the cp2k input plugin, since it requires molequeue (upstream Issue#476) - script_hashbang.patch adds hashbang to executable plugin script libavogadro2-1 Depends: python3 to use it * libAvogadroCore*.a static libraries not longer built * debian/rules: include /usr/share/dpkg/architecture.mk * Build-Depends: qttools5-dev (for Qt linguist and its Find cmake file) * debhelper compatibility level 13 -- Drew Parsons Wed, 03 Jun 2020 20:16:28 +0800 avogadrolibs (1.93.0-3) unstable; urgency=medium * debian/tests Depends: libgtest-dev -- Drew Parsons Wed, 12 Feb 2020 10:54:55 +0800 avogadrolibs (1.93.0-2) unstable; urgency=medium * add debian/tests for autopkgtest (currently tests C++ only) -- Drew Parsons Tue, 11 Feb 2020 13:46:16 +0800 avogadrolibs (1.93.0-1) unstable; urgency=medium * New upstream release. * Standards-Version: 4.5.0 -- Drew Parsons Thu, 06 Feb 2020 11:59:39 +0800 avogadrolibs (1.92.1-5) unstable; urgency=medium * mark libavogadro2-1 as Multi-Arch: same, and libavogadro-doc as Multi-Arch: foreign * Depends: openbabel not libopenbabel-dev. Closes: #948769. -- Drew Parsons Fri, 17 Jan 2020 18:41:21 +0800 avogadrolibs (1.92.1-4) unstable; urgency=medium * build dir uses DEB_HOST_GNU_TYPE not DEB_HOST_MULTIARCH -- Drew Parsons Tue, 31 Dec 2019 10:31:32 +1100 avogadrolibs (1.92.1-3) unstable; urgency=medium * configure to build documentation only for arch-indep builds -- Drew Parsons Tue, 31 Dec 2019 00:51:38 +1100 avogadrolibs (1.92.1-2) unstable; urgency=medium * debian/copyright: explicitly declare licences of i18n .po translation files. -- Drew Parsons Mon, 30 Dec 2019 11:48:13 +1100 avogadrolibs (1.92.1-1) unstable; urgency=low * Initial release. (Closes: #942397) - This is Avogadro 2, which is a rewrite of the original Avogadro. Hence name binary library package as libavogadro2-1 to distinguish from the older libavogadro1. - utility programs provided in avogadro-utils: avobabel avocjsontocml bodrparse encodefile qube resdataparse - documentation for libavogadro provided in libavogadro-doc * debian patch fix_spglib_include_path.patch fixes path to spglib.h * debian patch build_python3.patch enforces a Python3 build -- Drew Parsons Mon, 28 Oct 2019 23:45:44 +0800