gffread (0.12.7-8) unstable; urgency=medium
[ Charles Plessy ]
* Remove Breaks/Replace on cufflinks (<< 2.2.1+dfsg.1-4), as oldstable already has 2.2.1+dfsg.1-8+b1
[ Michael R. Crusoe ]
* d/tests/{control,run-tests}: instead, we explictly skip cnvkit on s390x
-- Michael R. Crusoe <crusoe@debian.org> Wed, 31 Jul 2024 12:54:36 +0200
gffread (0.12.7-7) unstable; urgency=medium
* d/tests/control: add skip-not-installable so that s390x's lack of
python3-pysam (for cnvkit) isn't a problem.
-- Michael R. Crusoe <crusoe@debian.org> Wed, 31 Jul 2024 12:41:17 +0200
gffread (0.12.7-6) unstable; urgency=medium
* d/tests: adjust architecture lists, enable more testing with riscv64
-- Michael R. Crusoe <crusoe@debian.org> Tue, 09 Jul 2024 13:19:28 +0200
gffread (0.12.7-5) unstable; urgency=medium
* Revert "d/t/*: work around uninstallable packages."
This reverts commit 7f28a236e8757d9fce7af87b806e38ddcb61a9b2, brought
in the previous package upload. Quoting Adrian: trinityrnaseq is back
in testing, and boost now defaults to 1.83.
Thanks to Adrian Bunk (Closes: #1073921)
* d/control: declare compliance to standards version 4.7.0.
* d/control: add myself to uploaders.
-- Étienne Mollier <emollier@debian.org> Thu, 20 Jun 2024 20:52:03 +0200
gffread (0.12.7-4) unstable; urgency=medium
* Team upload.
* d/t/*: work around uninstallable packages.
The change involves not testing gffread anymore against trinityrnaseq
until it is back to testing, and not testing against R BioC modules
until libboost 1.81 transition is finished. (Closes: #1033703)
* Update standards version to 4.6.2, no changes needed.
-- Étienne Mollier <emollier@debian.org> Tue, 20 Jun 2023 21:03:42 +0200
gffread (0.12.7-3) unstable; urgency=medium
* Fix watch file
* Standards-Version: 4.6.1 (routine-update)
-- Andreas Tille <tille@debian.org> Fri, 18 Nov 2022 12:14:12 +0100
gffread (0.12.7-2) unstable; urgency=medium
* Rebuild against new libgclib
-- Andreas Tille <tille@debian.org> Fri, 03 Dec 2021 11:37:16 +0100
gffread (0.12.7-1) unstable; urgency=medium
[ Andreas Tille ]
* New upstream version
* Fix watchfile to detect new versions on github
* New upstream version
* Standards-Version: 4.6.0 (routine-update)
* Autopkgtest: Restrictions: allow-stderr
[ Michael R. Crusoe ]
* debian/watch: rename downloaded file into something sensible
-- Andreas Tille <tille@debian.org> Wed, 13 Oct 2021 17:11:28 +0200
gffread (0.12.1-4) unstable; urgency=medium
* Team upload.
* Skip some new AUGUSTUS GTFs that are likely bad, causing autopkgtests to
fail.
-- Sascha Steinbiss <satta@debian.org> Fri, 08 Jan 2021 08:52:52 +0100
gffread (0.12.1-3) unstable; urgency=medium
* Team upload
* Fix a typo in ppc64el autopkgtest
-- Graham Inggs <ginggs@debian.org> Sun, 06 Dec 2020 06:09:58 +0000
gffread (0.12.1-2) unstable; urgency=medium
* Team upload
* Skip two failing tests from gff2aplot that were not run
previously due to being compressed (Closes: #962553)
* Adjust autopkgtest dependencies for various architectures
* Bump Standards-Version to 4.5.1, no changes
-- Graham Inggs <ginggs@debian.org> Sat, 05 Dec 2020 23:56:29 +0000
gffread (0.12.1-1) unstable; urgency=medium
* Team upload.
* New upstream version
* debhelper-compat 13 (routine-update)
* Build-depends on newer version of libgclib.
* Don't depend on creating a checkout of gclib during build
* Added myself to uploaders.
-- Steffen Moeller <moeller@debian.org> Sat, 08 Aug 2020 22:51:47 +0200
gffread (0.11.8-1) unstable; urgency=medium
* Adjust the autopkgtests to exclude the spades dependency on !amd64
* New upstream version
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
-- Michael R. Crusoe <michael.crusoe@gmail.com> Fri, 03 Apr 2020 11:43:09 +0200
gffread (0.11.7-2) unstable; urgency=medium
[ Steffen Moeller ]
* Standards-Version: 4.5.0
[ Michael R. Crusoe ]
* debian/tests/run-tests: s/ADTTMP/AUTOPKGTEST_TMP/g
* Explicity depend on the newer libgclib-dev
-- Michael R. Crusoe <michael.crusoe@gmail.com> Fri, 14 Feb 2020 14:22:24 +0100
gffread (0.11.7-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.5.0
-- Steffen Moeller <moeller@debian.org> Mon, 27 Jan 2020 11:04:06 +0100
gffread (0.11.6-1) unstable; urgency=medium
* Another test exemption from rtracklayer
* New upstream version
* Set upstream metadata fields: Repository.
* Remove obsolete fields Name from debian/upstream/metadata.
-- Michael R. Crusoe <michael.crusoe@gmail.com> Thu, 07 Nov 2019 13:58:28 +0100
gffread (0.11.5-1) unstable; urgency=medium
* Team upload.
* New upstream release.
* Add breaks/replaces on cufflinks (<< 2.2.1+dfsg.1-4). (Closes: #940915)
* Set upstream metadata fields: Name.
* Add autopkgtest
-- Michael R. Crusoe <michael.crusoe@gmail.com> Wed, 25 Sep 2019 12:50:00 +0200
gffread (0.11.4-2) unstable; urgency=medium
[ Helmut Grohne ]
* Fix FTCBFS: Pass LINKER to make. (Closes: #940692)
-- Andreas Tille <tille@debian.org> Thu, 19 Sep 2019 11:58:41 +0200
gffread (0.11.4-1) unstable; urgency=medium
* New upstream version
* debhelper-compat 12
* Standards-Version: 4.4.0
-- Andreas Tille <tille@debian.org> Thu, 08 Aug 2019 11:54:09 +0200
gffread (0.11.2-1) unstable; urgency=medium
* Initial release (Closes: #930545)
-- Andreas Tille <tille@debian.org> Sat, 15 Jun 2019 00:51:54 +0200