minimap2 (2.27+dfsg-1) unstable; urgency=medium * Team upload. * d/rules, d/clean: simply cleanup code. * d/rules: clean using pybuild. Closes: #1046060 -- Michael R. Crusoe Mon, 18 Mar 2024 17:12:17 +0100 minimap2 (2.26+dfsg-1) unstable; urgency=medium * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) * d/control: specify gnuplot-nox build-dep option first for consistency. * d/patches: forward some patches, update metadata -- Michael R. Crusoe Thu, 29 Feb 2024 15:44:29 +0100 minimap2 (2.24+dfsg-3) unstable; urgency=medium * Fix watch file * Standards-Version: 4.6.1 (routine-update) * Update lintian override info format in d/python3-mappy.lintian-overrides on line 2. -- Andreas Tille Wed, 30 Nov 2022 20:52:21 +0100 minimap2 (2.24+dfsg-2) unstable; urgency=medium * Team Upload. * Re-enable and adapt older simde patch to import properly on !x86 and !arm64 (Closes: #1004455) * d/t/control: Add superficial import test for mappy -- Nilesh Patra Sat, 12 Mar 2022 14:43:04 +0530 minimap2 (2.24+dfsg-1) unstable; urgency=medium * New upstream version -- Andreas Tille Thu, 17 Feb 2022 15:33:57 +0100 minimap2 (2.22+dfsg-3) unstable; urgency=medium * Team upload * Add SIMDe bits to python-sse4-arch.patch ; adjust SIMDe patch. Closes: #998015 -- Michael R. Crusoe Sun, 07 Nov 2021 19:23:30 +0100 minimap2 (2.22+dfsg-2) unstable; urgency=medium * Team upload * Fix non-x86 build. * mark do_not_use_natbib.bst.patch as not needing forwarding * Revive SIMDe patch * debian/copyright: exclude sse2neon in favor of libsimde-dev -- Michael R. Crusoe Sun, 07 Nov 2021 17:06:42 +0100 minimap2 (2.22+dfsg-1) unstable; urgency=medium * Team upload [ Andreas Tille ] * Fix watchfile to detect new versions on github * New upstream version * Standards-Version: 4.6.0 (routine-update) * Use sensible file name for uscan downloads [ Michael R. Crusoe ] * Refresh patches, dropping simde * Add setuptools as a build-dep -- Michael R. Crusoe Thu, 14 Oct 2021 12:59:39 +0200 minimap2 (2.17+dfsg-12) unstable; urgency=medium [ Michael Hudson-Doyle ] * d/patches/python-sse4-arch.patch: Only pass -msse4.1 to the compiler on amd64. Closes: #969596 -- Andreas Tille Tue, 15 Sep 2020 10:54:02 +0200 minimap2 (2.17+dfsg-11) unstable; urgency=medium * Add lintian-override * Manpage for minimap2.py -- Andreas Tille Tue, 07 Jul 2020 11:32:26 +0200 minimap2 (2.17+dfsg-10) unstable; urgency=medium * Provide Python3 interface * debhelper-compat 13 (routine-update) -- Andreas Tille Tue, 23 Jun 2020 21:40:16 +0200 minimap2 (2.17+dfsg-9) unstable; urgency=medium * Team upload. * Use the libsimde-dev package instead of the code copy -- Michael R. Crusoe Sun, 19 Apr 2020 14:49:51 +0200 minimap2 (2.17+dfsg-8) unstable; urgency=medium * Team upload. * Delete addLTO.patch Closes: #956136 -- Hamid Nassiby Mon, 13 Apr 2020 08:18:05 +0200 minimap2 (2.17+dfsg-7) unstable; urgency=medium * Merge changelog entries of several never released package versions * Add salsa-ci file (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Repository, Repository-Browse. * Add missing DEP3 fields -- Andreas Tille Wed, 25 Mar 2020 15:17:28 +0100 minimap2 (2.17+dfsg-6) unstable; urgency=medium * Team upload * Created -dev package * Standards-Version: 4.5.0 * Added Link-Time-Optimization * Added include files * d/control: Added Rules-Requires-Root flag * Manually invoking ranlib * In reaction to the FTPmaster's rejection notice - added copyright referenced in .tex - added current copyright holder (Dana Farber Institute) -- Steffen Moeller Sun, 22 Mar 2020 00:52:34 +0100 minimap2 (2.17+dfsg-2) unstable; urgency=medium [ Michael R. Crusoe ] * Team upload. * Add support for more architectures using the SIMD Everyhere library Closes: #922620 * Standards-Version: 4.4.1 [ Andreas Tille ] * Set upstream metadata fields: Bug-Database, Bug-Submit. -- Michael R. Crusoe Sun, 12 Jan 2020 18:22:11 +0100 minimap2 (2.17+dfsg-1) unstable; urgency=medium * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 -- Andreas Tille Thu, 01 Aug 2019 15:23:40 +0200 minimap2 (2.15+dfsg-2) unstable; urgency=medium * Team upload. * Fix FTBFS on armhf and arm64: pass relevant variable to make. Closes: #929275 -- Helmut Grohne Mon, 20 May 2019 17:26:01 +0200 minimap2 (2.15+dfsg-1) unstable; urgency=medium * New upstream version * debhelper 12 * Standards-Version: 4.3.0 -- Andreas Tille Fri, 11 Jan 2019 22:40:39 +0100 minimap2 (2.14+dfsg-1) unstable; urgency=low * Initial packaging (Closes: #906332) -- Andreas Tille Fri, 09 Nov 2018 23:36:05 +0100