mothur (1.33.3+dfsg-2) unstable; urgency=medium * Re-Add changes from BioLinux which reads in SVN: Add the important .pat files and tell Mothur how to find them (certainly not in /usr/bin) (see debian/patches/find_pat_files) -- Andreas Tille Fri, 25 Apr 2014 17:39:09 +0200 mothur (1.33.3+repack-0biolinux2) trusty; urgency=low * Refresh patches and build for Ubuntu Trusty -- Tim Booth Thu, 24 Apr 2014 18:41:42 +0100 mothur (1.33.3+dfsg-1) unstable; urgency=medium * New upstream version -- Andreas Tille Sat, 22 Mar 2014 21:33:31 +0100 mothur (1.33.0+dfsg-1) unstable; urgency=medium * New upstream version * debian/upstream -> debian/upstream/metadata * Standards-Version: 3.9.5 -- Andreas Tille Tue, 25 Feb 2014 13:31:27 +0100 mothur (1.31.2+dfsg-2) unstable; urgency=low * Team upload. * debian/patches/makefile.patch: Leave off -m64, which ia64 doesn't support and other 64-bit architectures don't need. (Closes: #721770.) -- Aaron M. Ucko Wed, 04 Sep 2013 22:37:31 -0400 mothur (1.31.2+dfsg-1) unstable; urgency=low * New upstream version * debian/watch: use dversionmangle to properly detect new upstream versions * debian/copyright: Add Files-Excluded to document what was removed from original source * debian/rules: Use enhanced uscan * debian/control: - cme fix dpkg-control - debhelper 9 - use anonscm for Vcs fields * debian/patches/uchime_hardening.patch: Hardening for uchime * debian/uchime.1 * debian/patches/spelling.patch: Some spelling corrections -- Andreas Tille Tue, 30 Jul 2013 14:32:44 +0200 mothur (1.31.2+repack-0biolinux1) precise; urgency=low * New upstream * All patches look OK -- Tim Booth Fri, 16 Aug 2013 12:09:01 +0100 mothur (1.30.2+repack-0ubuntu1) precise; urgency=low * New upstream * Drop unneeded patch from last time -- Tim Booth Tue, 30 Apr 2013 11:56:20 +0100 mothur (1.29.0+repack-0ubuntu1) precise; urgency=low * New upstream for January * Patch to fix compilation on MPI - not sure if it is right -- Tim Booth Tue, 15 Jan 2013 14:51:19 +0000 mothur (1.28.0+repack-precise2) precise; urgency=low * New upstream, build for precise * Enable mpi for 32-bit, for completeness * Note that this should really be version -0ubuntu2, but its too late to go there * Parallel build enabled -- Tim Booth Thu, 10 Jan 2013 15:22:35 +0000 mothur (1.27.0+repack-precise1) precise; urgency=low * Remove -march=native from makefile as this makes the result depend on the build machine - so a package built on a Core3 CPU won't work on a Xeon. -- Tim Booth Fri, 12 Oct 2012 11:41:04 +0100 mothur (1.27.0+repack-precise2) precise; urgency=low * New minor release from upstream * Build MPI version alongside regular version * ...but only for 64-bit -- Tim Booth Wed, 10 Oct 2012 11:20:43 +0100 mothur (1.25.0~repack-lucid3) lucid; urgency=low * Removed dependency on catchall - this belongs in the bio-linux-mothur package. Not sure what I was thinking there. -- Tim Booth Mon, 14 May 2012 10:57:22 +0100 mothur (1.25.0~repack-lucid2) lucid; urgency=low * Fix 32-bit build and add uchime (which should be packaged separately, but I've no time for that just now) -- Tim Booth Thu, 10 May 2012 10:43:04 +0100 mothur (1.25.0~repack-lucid1) lucid; urgency=low * Rebuild for Lucid with repack fudge again -- Tim Booth Wed, 09 May 2012 11:20:15 +0100 mothur (1.25.0-1) UNRELEASED; urgency=low * New upstream release * debian/upstream: more complete authors information in proper BibTeX format -- Andreas Tille Tue, 08 May 2012 18:00:19 +0200 mothur (1.24.1-1) unstable; urgency=low * New upstream version - adpated patches - droped debian/patches/kfreebsd.patch because it was applied upstream -- Andreas Tille Tue, 03 Apr 2012 09:05:44 +0200 mothur (1.23.1-1) unstable; urgency=low * New upstream version (including updating patches) * debian/upstream: - fixed typo: s/TITILE/TITLE/ - Moved DOI+PMID to references * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Build-Depends: gfortran * debian/get-orig-source: - be not that verbose - more reproducible creation of tarball - Strip some useless files from tarball (.*; *.o) * debhelper 9 (control+compat) * debian/copyright: DEP5 changes and verified using cme fix dpkg-copyright -- Andreas Tille Thu, 08 Mar 2012 14:52:47 +0100 mothur (1.22.2-2) unstable; urgency=low * debian/patches/kfreebsd.patch: Enable build on BSD machines (thanks to Christoph Egger and Robert Millan ) Closes: #650683 * debian/control: Fixed Vcs fields * debian/{control,rules}: drop explicite quilt dependency which is just given by source format 3.0 (quilt) -- Andreas Tille Tue, 06 Dec 2011 17:14:49 +0100 mothur (1.22.2~repack-ubuntu1) lucid; urgency=low * Backport for Ubuntu * Need to fudge version as upstream was repacked by Andreas' script -- Tim Booth Mon, 05 Dec 2011 17:37:16 +0000 mothur (1.22.2-1) unstable; urgency=low * New upstream version * debian/patches/drop_sse_option.patch: Fix for FTBFS: unrecognized command line option '-msse2' (Thanks for the patch to Nobuhiro Iwamatsu ) Closes: #648255 -- Andreas Tille Thu, 10 Nov 2011 08:38:32 +0100 mothur (1.22.1-1) unstable; urgency=low [ Thorsten Alteholz ] * new upstream version * adapted patches to this version * debian/control: no dependency on quilt needed * debian/control + debian/compat: dh version set to >= 8 [ Andreas Tille ] * debian/control: readd quilt dependency because build fails otherwise * debian/copyright: fix spelling error -- Andreas Tille Mon, 07 Nov 2011 11:14:17 +0100 mothur (1.18.1-1) unstable; urgency=low * New upstream version (adapted patches to new location of makefile) * debian/rules: No need to specify SOURCEDIR any more * Added Tim Booth as Uploader, removed Sri Girish Srinivasa Murthy from uploaders * Standards-Version: 3.9.2 (no changes needed) -- Andreas Tille Tue, 26 Apr 2011 19:58:45 +0200 mothur (1.18.0-1ubuntu1) lucid; urgency=low * Rebuild for PPA * Source now comes in subdirectory Mothur.source - modify rules file to handle this -- Tim Booth Thu, 14 Apr 2011 14:50:24 +0100 mothur (1.17.3-1) unstable; urgency=low * New upstream version, which specifically solves some copyright questions of ftpmaster (Charles, thanks for reviewing debian/copyright) Closes: #589675 * Updated patches * debian/copyright: Clarified license issues -- Andreas Tille Wed, 30 Mar 2011 09:01:52 +0200 mothur (1.15.0-1ubuntu1) lucid; urgency=low * Rebuild for upload to PPA, license or not. -- Tim Booth Sun, 30 Jan 2011 12:14:18 +0000 mothur (1.15.0-1) unstable; urgency=low * Initial release (Closes: #589675) -- Andreas Tille Wed, 02 Feb 2011 08:59:45 +0100