rdkit (202503.1-2) unstable; urgency=medium
* debian/patches/disable_riscv64_timeout_tests.patch: Add one more test which
times out on riscv64.
-- Michael Banck <mbanck@debian.org> Mon, 07 Apr 2025 16:22:36 +0200
rdkit (202503.1-1) unstable; urgency=medium
* New upstream release.
* debian/patches/disable_riscv64_timeout_tests.patch: Refreshed.
* debian/patches/better_enums.patch: Vendorize better_enums header.
-- Michael Banck <mbanck@debian.org> Sun, 06 Apr 2025 00:16:38 +0200
rdkit (202409.6-2) unstable; urgency=medium
* debian/patches/disable_riscv64_timeout_tests.patch: New patch, disables two
tests that time out on the riscv64 autobuilders.
-- Michael Banck <mbanck@debian.org> Sun, 09 Mar 2025 11:04:30 +0100
rdkit (202409.6-1) unstable; urgency=medium
* New upstream point release.
* debian/patches/disable_pgsql_test.patch: Refreshed.
* debian/control.in, debian/control (Build-Depends): Add architecture-is-
little-endian (Closes: #1093086).
-- Michael Banck <mbanck@debian.org> Tue, 04 Mar 2025 01:24:41 +0100
rdkit (202409.4-1) unstable; urgency=medium
* New upstream point release.
* debian/patches/sphinx_compile_fixes.patch: Refreshed.
* debian/patches/postgres_cmakelists_fixes.patch: Likewise.
* debian/patches/disable_pgsql_test.patch: Likewise.
-- Michael Banck <mbanck@debian.org> Wed, 15 Jan 2025 18:30:22 +0100
rdkit (202409.2-3) unstable; urgency=medium
[ Michael Banck ]
* debian/patches/disable_python_test.patch: New patch, disables a python test
that fails on all architectures.
* debian/rules (override_dh_auto_test): No longer ignore testuite failures.
* debian/tests/importcheck: New autopkgtest, tests importing the python
module.
[ Andrius Merkys ]
* Drop support for 32bit architectures (Closes: #1083076)
* Cleanup debian/copyright.
-- Andrius Merkys <merkys@debian.org> Mon, 13 Jan 2025 03:40:17 -0500
rdkit (202409.2-2) unstable; urgency=medium
* debian/rules (DH_AUTO_CONFIGURE_OPTS): Added
-DRDK_BUILD_PUBCHEMSHAPE_SUPPORT=OFF (Closes: #1088354).
-- Michael Banck <mbanck@debian.org> Wed, 27 Nov 2024 20:11:03 +0100
rdkit (202409.2-1) unstable; urgency=medium
* New upstream release.
* debian/patches/NoDownloads.patch: Updated.
* debian/patches/sphinx_imgconverter.patch: Likewise.
* debian/patches/sphinx_compile_fixes.patch: Likewise.
* debian/patches/pg16: Removed, no longer needed.
* debian/control.in, debian/control (Build-Depends): Added
libboost-numpy-dev and python3-pytest.
* debian/patches/disable_pgsql_test.patch: New patch, disables the Postgres
regression test as no Postgres server is supposed to be running during
package build and the Postgres extension is tested via autopkgtest.
* debian/patches/fix_inchi_linking.patch: New patch, fixes linking of
libRDKitRDInchiLib with libinchi (Closes: #1077055).
* debian/patches/disable_inchi_test.patch: New patch, disables the INCHI test
as it times out.
* debian/control.in, debian/control: Revert back to postgresql-PGVERSION.
* debian/rules (override_dh_auto_clean): Remove Postgres build directories.
* debian/rules: Switch to building Postgres extension via cmake. (Closes:
#1086226).
* debian/patches/postgres_cmakelists_fixes.patch: New patch, makes the
Postgres extension CMakefile usable directly.
* debian/rules (override_dh_auto_build): Re-enable latex documentation build
(Closes: #1069873).
-- Michael Banck <mbanck@debian.org> Tue, 26 Nov 2024 22:46:44 +0100
rdkit (202309.3-7) unstable; urgency=medium
* No-changes source-only upload.
-- Andrius Merkys <merkys@debian.org> Mon, 23 Sep 2024 07:04:09 -0400
rdkit (202309.3-6) unstable; urgency=medium
* Team upload for PostgreSQL 17.
-- Christoph Berg <myon@debian.org> Sun, 15 Sep 2024 20:47:37 +0200
rdkit (202309.3-5) unstable; urgency=medium
* Add myself to uploaders.
* Build with inchi support (Closes: #964773)
-- Andrius Merkys <merkys@debian.org> Wed, 04 Sep 2024 02:40:47 -0400
rdkit (202309.3-4) unstable; urgency=medium
* Team upload.
* Upload to unstable for 64-bit time_t transition (Closes: #1064311)
-- Andrius Merkys <merkys@debian.org> Tue, 28 May 2024 00:55:45 -0400
rdkit (202309.3-4~exp1) experimental; urgency=medium
* Team upload.
* Rename libraries for 64-bit time_t transition.
* Disable building of the PDF documentation due to #1069873.
-- Andrius Merkys <merkys@debian.org> Fri, 26 Apr 2024 09:28:39 +0300
rdkit (202309.3-3) unstable; urgency=medium
* Team upload.
* Include CMake files in librdkit-dev (Closes: #1064953)
-- Andrius Merkys <merkys@debian.org> Wed, 28 Feb 2024 04:43:17 -0500
rdkit (202309.3-2.1) experimental; urgency=medium
* Non-maintainer upload.
* Rename libraries for 64-bit time_t transition.
-- Steve Langasek <vorlon@debian.org> Mon, 19 Feb 2024 20:49:34 +0000
rdkit (202309.3-2) unstable; urgency=medium
* Team upload.
* Fix postgres_Makefile_fixes.patch for PG <= 13.
* Ignore test failures on i386 and s390x.
-- Christoph Berg <myon@debian.org> Wed, 17 Jan 2024 13:03:19 +0000
rdkit (202309.3-1) unstable; urgency=medium
* New upstream point release.
* debian/patches/catch2_v3_support.patch: Removed, no longer needed.
-- Michael Banck <mbanck@debian.org> Fri, 29 Dec 2023 16:59:15 +0100
rdkit (202309.2-1) unstable; urgency=medium
* New upstream release.
* debian/patches/sphinx_imgconverter.patch: Refreshed.
* debian/patches/sphinx_compile_fixes.patch: Likewise.
* debian/patches/catch2_header.patch: Removed, no longer needed.
* debian/patches/catch2_v3_support.patch: New patch, add support for v3 of
catch2 as system library, taken from upstream pull request #6898 (Closes:
#1054790).
* debian/patches/pg16: Updated with changes from upstream pull request #6733.
* debian/patches/postgres_Makefile_fixes.patch: Updated for new changes.
-- Michael Banck <mbanck@debian.org> Sun, 12 Nov 2023 20:13:03 +0100
rdkit (202303.3-3) unstable; urgency=medium
* Source-only team upload.
-- Christoph Berg <myon@debian.org> Thu, 21 Sep 2023 10:44:34 +0200
rdkit (202303.3-2) unstable; urgency=medium
* Team upload for PostgreSQL 16.
* Fix compatibility with PostgreSQL 16.
* Use ${postgresql:Depends}.
-- Christoph Berg <myon@debian.org> Wed, 20 Sep 2023 13:49:49 +0000
rdkit (202303.3-1) unstable; urgency=medium
* Team upload.
* New upstream release.
- Builds with GCC-13. (Closes: #1037837)
- Builds with LTO enabled. (Closes: #1015650)
* debian/rules (override_dh_install): work around files going to a
versioned /usr/lib/python3.XX/site-packages directory, instead of the
desired /usr/lib/python3/dist-packages.
* debian/rules (override_dh_auto_clean): Docs/Book/Cookbook.rst is shipped
in the current upstream tarball, so don't remove it in the clean target.
* debian/control, control.in:
- rdkit-doc: add Depends on libjs-jquery, libjs-underscore. (Closes: #990653)
- Add Build-Depends on python3-myst-parser.
- Update B-Ds on transitional packages, libfreetype6-dev -> libfreetype-dev
and libcairo-dev -> libcairo2-dev.
- Bump Standards-Version to 4.6.2 and remove unused fields.
* debian/upstream/metadata: Add Repository, Bug-Database URLs.
* debian/rules: Remove obsolete --parallel option.
* Rebase patches and update lintian overrides.
-- Nicholas Breen <nbreen@debian.org> Sun, 03 Sep 2023 09:06:22 -0700
rdkit (202209.3-1) unstable; urgency=medium
* New upstream point release.
* debian/patches/postgres_Makefile_fixes.patch: Updated, removed one hunnk
that got applied upstream.
-- Michael Banck <mbanck@debian.org> Sat, 14 Jan 2023 13:24:33 +0100
rdkit (202209.1-1) unstable; urgency=medium
* New upstream release.
* debian/patches/gcc12_compile_fixes.patch: Removed, applied upstream.
* debian/patches/postgres_compile_fixes.patch: Likewise.
* debian/patches/postgres_Makefile_fixes.patch: Refreshed.
* debian/patches/sphinx_compile_fixes.patch: Likewise.
* debian/patches/sphinx_imgconverter.patch: Likewise.
* debian/patches/postgres_Makefile_fixes.patch: Compile clang bytecode with
-std=c++17.
* debian/patches/postgres_Makefile_fixes.patch: Update RDKit version number.
* debian/gbp.conf: Set import-orig filter for upstream .gitattributes.
-- Michael Banck <mbanck@debian.org> Sat, 05 Nov 2022 10:43:38 +0100
rdkit (202203.2-3) unstable; urgency=medium
* Upload for PostgreSQL 15.
* R³: no.
* DH 13.
* debian/tests: Use 'make' instead of postgresql-server-dev-all.
* debian/watch: Look at GitHub tags instead of releases.
-- Christoph Berg <myon@debian.org> Mon, 24 Oct 2022 17:23:15 +0200
rdkit (202203.2-2) unstable; urgency=medium
* Team upload.
* debian/patches/gcc12_compile_fixes.patch: Correct a variable definition
required to build with GCC 12. (Closes: #1013028)
-- Nicholas Breen <nbreen@debian.org> Mon, 08 Aug 2022 10:09:27 -0700
rdkit (202203.2-1) unstable; urgency=medium
* Team upload.
[ Debichem Team ]
* New upstream release.
[ Michael Banck ]
* debian/patches/postgres_disable_failing_tests.patch: Removed, no longer
needed.
* debian/patches/postgres_compile_fixes.patch: Refreshed.
[ Christoph Berg ]
* debian/patches/extra_float_digits: Set e_f_t=0 in bfpgin test.
* debian/salsa-ci.yml: Set DEB_BUILD_OPTIONS: noautodbgsym to fit in Salsa's
maximum artifact size.
* debian/source/lintian-overrides: Override source-is-missing
Code/Demos/RDKit/Draw/draw.html.
* debian/clean: Remove some generated Code/RDGeneral/*.h files.
* debian/clean: Remove .gitattributes.
-- Christoph Berg <myon@debian.org> Wed, 27 Apr 2022 10:49:49 +0200
rdkit (202109.2-1) unstable; urgency=medium
* New upstream release.
+ Includes updated PostgreSQL regression outputs (Closes: #1000579).
* debian/patches/postgres_compile_fixes.patch: Refreshed.
* debian/patches/postgres_Makefile_fixes.patch: Add RDK_TOOLKIT_VERSION
definition, hardcoded to current release for now.
* debian/rules (DH_AUTO_CONFIGURE_OPTS): Added -DRDK_INSTALL_COMIC_FONTS=OFF
(Closes: #999767).
* debian/control.in,debian/control (Build-Depends): Added libcairo-dev.
* debian/rules (DH_AUTO_CONFIGURE_OPTS): Added -DRDK_BUILD_CAIRO_SUPPORT=ON.
-- Michael Banck <mbanck@debian.org> Sun, 28 Nov 2021 09:45:28 +0100
rdkit (202103.5-1) unstable; urgency=medium
* New upstream release.
* debian/patches/sphinx_compile_fixes.patch: Refreshed.
* debian/control (postgresql-PGVERSION-rdkit): Bump PostgreSQL version to 14
(Closes: #997745).
-- Michael Banck <michael.banck@credativ.de> Thu, 11 Nov 2021 18:22:40 +0100
rdkit (202009.5-2) unstable; urgency=medium
* Team upload.
* Adding missing build dependency on tex-gyre (Closes: #995241)
-- Andrius Merkys <merkys@debian.org> Tue, 28 Sep 2021 08:56:39 -0400
rdkit (202009.5-1) unstable; urgency=medium
* New upstream point release.
* debian/watch: Updated.
* debian/patches/sphinx_compile_fixes.patch: Drop hunk that got applied
upstream.
* debian/patches/postgres_compile_fixes.patch: Refreshed.
-- Michael Banck <mbanck@debian.org> Fri, 14 May 2021 23:46:40 +0200
rdkit (202009.4-1) unstable; urgency=medium
* New upstream point release.
-- Michael Banck <mbanck@debian.org> Sun, 21 Feb 2021 11:42:05 +0100
rdkit (202009.3-2) unstable; urgency=medium
* debian/control.in,debian/control (Build-Depends): Added libeigen3-dev.
-- Michael Banck <mbanck@debian.org> Tue, 19 Jan 2021 15:41:58 +0100
rdkit (202009.3-1) unstable; urgency=medium
* New upstream point release.
* debian/patches/postgres_compile_fixes.patch: Updated, dropped hunks that
got applied upstream.
-- Michael Banck <mbanck@debian.org> Sun, 17 Jan 2021 22:35:22 +0100
rdkit (202009.1-1) unstable; urgency=medium
[ Andrius Merkys ]
* Team upload.
* New upstream version 202009.1
* Refreshing patches.
[ Michael Banck ]
* debian/control.in,debian/control (Build-Depends): Added libfreetype6-dev.
* debian/patches/postgres_compile_fixes.patch: Updated.
* debian/patches/sphinx_compile_fixes.patch: Add new compile fix.
* debian/control.in,debian/control (Build-Depends): Added python3-sqlalchemy.
-- Michael Banck <mbanck@debian.org> Sun, 17 Jan 2021 18:13:28 +0100
rdkit (202003.4-4) unstable; urgency=medium
* Team upload.
* No-changes source-only upload.
-- Andrius Merkys <merkys@debian.org> Mon, 02 Nov 2020 01:09:33 -0500
rdkit (202003.4-3) unstable; urgency=medium
* Team upload.
* Updating postgresql version (Closes: #973027).
-- Andrius Merkys <merkys@debian.org> Wed, 28 Oct 2020 09:10:34 -0400
rdkit (202003.4-2) unstable; urgency=medium
* debian/patches/postgres_compile_fixes.patch: New patch, fixes compile
errors on PostgreSQL-12 (Closes: #964656).
* debian/patches/sphinx_compile_fixes.patch: New patch, fixes build failures
with Sphinx-3.1 (Closes: #963637).
-- Michael Banck <mbanck@debian.org> Wed, 23 Sep 2020 09:35:31 +0200
rdkit (202003.4-1) unstable; urgency=medium
* New upstream release.
* debian/patches/postgres_Makefile_fixes.patch: Updated.
* debian/patches/postgres_disable_failing_tests.patch: Likewise.
* debian/rules (DH_AUTO_CONFIGURE_OPTS): Added -DBoost_NO_BOOST_CMAKE=TRUE.
-- Michael Banck <mbanck@debian.org> Tue, 07 Jul 2020 20:11:43 +0200
rdkit (201909.1-4) unstable; urgency=medium
* Team upload.
* Replacing libschroedinger-coordgenlibs-dev with libcoordgen-dev.
* No need to patch Code/cmake/Modules/Findcoordgen.cmake anymore.
-- Andrius Merkys <merkys@debian.org> Tue, 12 May 2020 06:21:19 -0400
rdkit (201909.1-3) unstable; urgency=medium
* Team upload.
* Fixing FTBFS with llvm-10 (Closes: #955669).
* Replacing libschroedinger-maeparser-dev with libmaeparser-dev
(Closes: #945985).
* Bumping versioned build-depends of libschroedinger-coordgenlibs-dev.
-- Andrius Merkys <merkys@debian.org> Mon, 06 Apr 2020 09:34:18 -0400
rdkit (201909.1-2) unstable; urgency=medium
* Team upload.
* Building without URF support as it tries to download unpackaged software
(Closes: #950141).
-- Andrius Merkys <merkys@debian.org> Wed, 29 Jan 2020 11:08:40 -0500
rdkit (201909.1-1) unstable; urgency=medium
* New upstream release.
* debian/control: Update extension to postgresql-12-rdkit.
* debian/patches/postgres_Makefile_fixes.patch: Updated for llvm9.
* debian/patches/postgres_alternative_test_outputs.patch: New patch, adds
alternative regression tests outputs for PostgreSQL 12.
-- Michael Banck <mbanck@debian.org> Sun, 03 Nov 2019 06:55:15 +0100
rdkit (201903.1-2) unstable; urgency=medium
* Team upload.
[ Daniel Leidert ]
* Add CI support
* Use salsa-ci.yml as CI config and fix gbp.conf
* Trigger rebuild
[ Andrius Merkys ]
* Removing build-dependency on no longer existing texlive-generic-extra
(Closes: #933210)
-- Andrius Merkys <merkys@debian.org> Tue, 20 Aug 2019 01:11:38 -0400
rdkit (201903.1-1) unstable; urgency=medium
* New upstream release.
* debian/copyright: Removed Files-Excluded, no longer needed.
* debian/patches/NoDownloads.patch: Remove CoordGen-specific hunks and add
another CoordGen-specific hunk that drops the template.mae template
support.
* debian/patches/sphinx_imgconverter.patch: Updated.
* debian/patches/postgres_v11_support.patch: Removed, no longer needed.
* debian/patches/testcase_32bit_fix.patch: Likewise.
* debian/patches/fix_coordgen_include_path.patch: Likewise.
* debian/control.in (Build-Depends): Added libboost-iostreams-dev.
* debian/control.in (Build-Depends): Added versioned Depends on version 1.1-4
of libschroedinger-coordgenlibs-dev.
* debian/control.in (python-rdkit): Package removed.
* debian/control.in (Build-Depends): Removed python-dev, python-numpy,
python-pandas and python-pil.
* debian/rules: Removed python(2) support.
* debian/control.in (Build-Depends): Added versioned Depends on version 1.2-1
of libschroedinger-maeparser-dev.
* debian/control: Regenerated.
* debian/rules (override_dh_install): Remove pycache directory before
install.
-- Michael Banck <mbanck@debian.org> Tue, 23 Jul 2019 12:27:30 -0300
rdkit (201809.1+dfsg-7) unstable; urgency=medium
* Team upload.
[ Alexandre Mestiashvili ]
* Update d/control.in, add python3-rdkit package and python3 build-deps
(Closes: #919161)
* Update d/rules, enable hardening, build python2 and python3 bindings
* Remove debian/python-rdkit.install, install modules via d/rules
* Update d/control with pg_buildext updatecontrol
-- Andrius Merkys <merkys@debian.org> Wed, 01 May 2019 07:56:24 -0400
rdkit (201809.1+dfsg-6) unstable; urgency=medium
* debian/patches/fix_coordgen_include_path.patch: New patch, fixes the
include path for system-installed coordgen headers.
-- Michael Banck <mbanck@debian.org> Thu, 31 Jan 2019 14:20:27 +0100
rdkit (201809.1+dfsg-5) unstable; urgency=medium
* debian/patches/series: Reenabled and refreshed NoDownloads.patch (Closes:
#920986).
-- Michael Banck <mbanck@debian.org> Thu, 31 Jan 2019 12:36:47 +0100
rdkit (201809.1+dfsg-4) unstable; urgency=medium
* debian/patches/postgres_Makefile_fixes.patch: Replace @RDKIT_PARALLEL_SAFE@
tag according to version.
* debian/control.in: Added libschroedinger-coordgenlibs-dev and
libschroedinger-maeparser-dev.
* debian/control: Regenerated.
* debian/rules (override_dh_auto_configure): Removed
-DRDK_BUILD_COORDGEN_SUPPORT=OFF and -RDK_BUILD_MOLINTERCHANGE_SUPPORT=OFF.
* debian/patches/disable_hanging_test.patch: Removed and replaced with ...
* debian/patches/testcase_32bit_fix.patch: ... this patch, taken from
upstream commit 3f3613c8.
-- Michael Banck <mbanck@debian.org> Sat, 26 Jan 2019 15:09:55 +0100
rdkit (201809.1+dfsg-3) unstable; urgency=medium
* debian/control.in (Build-Depends): Removed python-epydoc (Closes: #881562).
* debian/control: Regenerated.
-- Michael Banck <mbanck@debian.org> Wed, 09 Jan 2019 10:58:57 +0100
rdkit (201809.1+dfsg-2) unstable; urgency=medium
* debian/patches/catch2_header.patch: New patch, adds the catch2 headers from
https://github.com/catchorg/Catch2/ which are otherwise downloaded during
build.
-- Michael Banck <mbanck@debian.org> Wed, 09 Jan 2019 10:46:23 +0100
rdkit (201809.1+dfsg-1) unstable; urgency=medium
* New upstream release.
* debian/patches/disable_hanging_test.patch: Updated.
* debian/copryright (Files-Excluded): Removed files no longer present in the
upstream tarballs.
* debian/patches/sphinx_imgconverter.patch: New patch, enabled the Sphinx
imgconverter extension in order to conver the .svg files for LaTeX.
* debian/control.in (Build-Depends): Added imagemagick and librsvg2-bin.
* debian/control: Regenerated.
* debian/rules (override_dh_auto_build): Remove epydoc build, no longer
present upstream.
-- Michael Banck <mbanck@debian.org> Wed, 09 Jan 2019 00:00:46 +0100
rdkit (201803.4+dfsg-3) unstable; urgency=medium
* debian/patches/postgres_Makefile_fixes.patch: Remove -mpopcnt from
PG_CPPFLAGS.
* debian/control.in (postgresql-PGVERSION-rdkit/Section): Fixed.
* debian/control.in: Fixed spelling error in description.
* debian/control.in (postgresql-PGVERSION-rdkit/Description): Shortened short
description.
* debian/control: Regenerated.
-- Michael Banck <mbanck@debian.org> Tue, 08 Jan 2019 21:00:28 +0100
rdkit (201803.4+dfsg-2) unstable; urgency=medium
[ Andreas Tille ]
* Point Vcs fields to Salsa
[ Michael Banck ]
* debian/patches/disable_hanging_test.patch: New patch, removes the
testEnumeration test, which makes 32-bit architectures hang
(Closes: #894202).
-- Michael Banck <mbanck@debian.org> Tue, 08 Jan 2019 17:03:28 +0100
rdkit (201803.4+dfsg-1) unstable; urgency=medium
* New upstream release.
* Team upload.
[ Steffen Moeller ]
* Standards-Version: 4.2.1
[ Michael Banck ]
* debian/rules (override_dh_auto_configure): -DRDK_BUILD_COORDGEN_SUPPORT=OFF
and -RDK_BUILD_MOLINTERCHANGE_SUPPORT=OFF added.
* debian/patches/series: Disabled NoDownloads.patch.
* debian/control (Build-Depends): Added postgresql-server-dev-all.
* debian/control.in: New file, add postgresql-PGVERSION-rdkit package.
* debian/control: Refreshed for unstable.
* debian/pgversions: New file.
* debian/patches/postgres_v11_support.patch: New patch, adds support for
PostgreSQL 11.
* debian/rules: Add PostgreSQL extension support via pg_buildext.
* debian/patches/postgres_Makefile_fixes.patch: New patch, adds assorted
fixes for the PostgreSQL Cartridge Makefile.
* debian/patches/postgres_disable_failing_tests.patch: New patch, disables
some installcheck tests that fail with Boost assertions.
* debian/tests/control, debian/tests/installcheck: Add autopkgtests for the
PostgreSQL Cartridge.
-- Michael Banck <mbanck@debian.org> Sun, 09 Dec 2018 14:10:19 +0100
rdkit (201709.3+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream release.
Closes: #893177
* d/watch: uversionmangle to match chosen Debian version
* Build-Depends: s/python-imaging/python-pil/
* Fix doc generation by using python3-sphinx and python3-recommonmark
in Build-Depends
-- Andreas Tille <tille@debian.org> Mon, 26 Mar 2018 13:18:47 +0200
rdkit (201603.5+dfsg-1) unstable; urgency=medium
* Team upload.
* Moved packaging from SVN to Git
* DEP5
* Repack tarball to exclude *.chm file
* Build-Depends: latexmk
Closes: #872246
* Standards-Version: 4.1.2
-- Andreas Tille <tille@debian.org> Mon, 18 Dec 2017 12:09:00 +0100
rdkit (201603.5-2) unstable; urgency=medium
* Team upload.
* debian/control (Build-Depends): Added pandoc and
texlive-generic-extra. (Closes: #831264)
* debian/rules (override_dh_auto_configure): Added
-DRDK_OPTIMIZE_NATIVE=OFF to prevent FTBFS on ppc64el.
-- Graham Inggs <ginggs@debian.org> Mon, 07 Nov 2016 14:50:50 +0200
rdkit (201603.5-1) unstable; urgency=medium
* New upstream release. New features include:
- Addition of parsers/writers for sequence notation, FASTA, and basic HELM
- Improved conformation generation based on experimental torsional
parameters
- Much better filtering of generated conformations to ensure they
match the chirality of the input structure
- New method for enumerating molecular resonance structures
- Addition of a molecular FilterCatalog data structure
[ Daniel Leidert ]
* debian/compat: Raised to level 9.
* debian/control (Build-Depends): Switched to dh-python (closes: #786180).
(Standards-Version): Bumped to 3.9.6.
(Depends): Dropped python-numpy and let dh_numpy handle this.
* debian/rules: Added override for dh_python2 and call dh_numpy.
* debian/watch: Updated after project moved to Github.
* debian/patches/series: Added.
[ Michael Banck ]
* debian/rules (override_dh_auto_clean): No longer remove
Code/RDGeneral/versions.h, this is shipped upstream now.
* debian/rdkit-doc.install: Removed, no longer needed.
* debian/rules (override_dh_installchangelogs): Update for new ReleaseNotes
extension.
* debian/rules (override_dh_auto_clean): Added Code/RDGeneral/versions.cpp
and auto-generated restructed-text source files.
-- Michael Banck <mbanck@debian.org> Sun, 23 Oct 2016 23:07:02 +0200
rdkit (201503-2) unstable; urgency=medium
* debian/rules (override_dh_install): Create $(DOCDIR).
-- Michael Banck <mbanck@debian.org> Tue, 09 Jun 2015 01:31:58 +0200
rdkit (201503-1) unstable; urgency=medium
* New upstream release (closes: #785192).
* debian/control (Description): Updated.
* debian/control (Build-Depends): Added python-sphinx
* debian/rules (override_dh_auto_build): New rule, build PDF user
documentation.
* debian/control (Build-Depends): Added doxygen and python-epydoc.
* debian/rdkit-doc.dirs: New file.
* debian/rules (DOCDIR): New variable.
* debian/rdkit-doc.install: Only install overview presentation.
* debian/rules (override_dh_auto_build): Build python and C++ API
documentation with python-epydoc and doxygen, as well as HTML
documentation.
* debian/rules (override_dh_install): Install PDF and HTML documentation.
* debian/rdkit-doc.doc-base: Reference PDF/HTML documentation and no longer
the overview PDF.
* debian/rules (override_dh_auto_clean): Remove files generated while
building documentation.
* debian/control (Build-Depends): Added texlive-latex-base,
texlive-latex-recommended, texlive-latex-extra and
texlive-fonts-recommended.
-- Michael Banck <mbanck@debian.org> Sun, 07 Jun 2015 15:07:00 +0200
rdkit (201403-1) unstable; urgency=medium
* New upstream release.
* debian/patches/733359_bison3_compatibility.patch: Dropped. Fix applied to upstream.
* debian/patches/series: Removed.
-- Michael Banck <mbanck@debian.org> Sat, 25 Oct 2014 19:11:53 +0200
rdkit (201309-1) unstable; urgency=low
* New upstream release.
[ Daniel Leidert ]
* debian/control (Standards-Version): Bumped to 3.9.5.
* debian/patches/733359_bison3_compatibility.patch: Added.
- Fix syntax for bison 3.x to fix FTBFS (closes: #733359).
* debian/patches/series: Added.
-- Debichem Team <debichem-devel@lists.alioth.debian.org> Sun, 29 Dec 2013 01:53:13 +0100
rdkit (201306-2) unstable; urgency=low
[ Daniel Leidert ]
* debian/control (Build-Depends): Added python-imaging for pythonTestDirChem.
* debian/rules (override_dh_auto_test): Fixed LD_LIBRARY_PATH to re-enable
tests. Added path to rdchem.so to PYTHONPATH to fix pythonTestDirChem.
-- Debichem Team <debichem-devel@lists.alioth.debian.org> Thu, 01 Aug 2013 00:31:14 +0200
rdkit (201306-1) unstable; urgency=low
* New upstream release.
[ Daniel Leidert ]
* debian/control (Vcs-Browser, Vcs-Svn): Fixed vcs-field-not-canonical.
* debian/patches/fix_ftbfs_mtsss.patch: Dropped. Fix applied to upstream.
* debian/patches/series: Removed.
-- Debichem Team <debichem-devel@lists.alioth.debian.org> Tue, 30 Jul 2013 01:58:06 +0200
rdkit (201303-1) unstable; urgency=low
* New upstream release.
[ Michael Banck ]
* debian/patches/big-endian_support.patch: Removed, applied upstream.
* debian/rules (override_dh_auto_test): Honor DEB_BUILD_OPTIONS=nocheck.
* debian/rules (override_dh_auto_test): Ignore test suite failures for now.
* debian/rules (override_dh_install): New target, run dh_numpy.
[ Daniel Leidert ]
* debian/control: Dropped DM-Upload-Allowed. Added Provides and
XB-Python-Version for python package.
(Build-Depends): Added libboost-system-dev and libboost-thread-dev.
Added python-pandas for tests.
(Standards-Version): Bumped to 3.9.4.
(Section): Fixed binary-control-field-duplicates-source.
(Depends): Added missing depends to library for dev package. Added
fonts-freefont-ttf because python-rdkit uses FreeSans.ttf.
* debian/copyright: Updated.
* debian/librdkit1.lintian-overrides: Added.
* debian/python-rdkit.links: Add link for FreeSans.ttf.
* debian/rdkit-doc.doc-base: Added.
* debian/rules: Enabled hardening. Installed upstream changelog.
(override_dh_auto_configure): Added -DRDK_BUILD_THREADSAFE_SSS=ON,
-DCMAKE_SKIP_RPATH and -DCMAKE_BUILD_TYPE=None.
(override_dh_install): List missing files.
* debian/patches/fix_ftbfs_mtsss.patch: Added.
- Fix linkage of libRDBoost.so when using -DRDK_BUILD_THREADSAFE_SSS=ON.
* debian/patches/series: Adjusted.
-- Debichem Team <debichem-devel@lists.alioth.debian.org> Sat, 25 May 2013 12:48:23 +0200
rdkit (201203-3) unstable; urgency=low
* debian/patches/big-endian_support.patch: New patch, fixes big-endian
architectures, taken from upstream revisions 2071, 2079, 2080 and 2140.
* debian/rules (override_dh_auto_test): Activate testsuite again
(Closes: #678188).
-- Michael Banck <mbanck@debian.org> Sat, 28 Jul 2012 21:18:42 +0200
rdkit (201203-2) unstable; urgency=low
* debian/rules (override_dh_auto_test): Deactivated for now
(Closes: #670053, #670054).
-- Michael Banck <mbanck@debian.org> Tue, 12 Jun 2012 13:45:10 +0200
rdkit (201203-1) unstable; urgency=low
* New upstream release.
-- Michael Banck <mbanck@debian.org> Fri, 18 May 2012 15:09:10 +0200
rdkit (201112-1) unstable; urgency=low
* New upstream release. The RDKit book license has been clarified to
Creative Commons Attribution-ShareAlike 3.0 License, so a stripped
original tarball is no longer required.
[ Michael Banck ]
* debian/control (python-rdkit): Added python-numpy to Depends.
* debian/rdkit-doc.install: Fix path (Closes: #661976).
* debian/rules (override_dh_auto_test): Copy over python files into obj
directory and set $PYTHONPATH correctly, thanks to Jakub Wilk. Also set
$RDBASE accordingly.
* debian/rules (override_dh_auto_clean): New target, remove some files added
during build which do not get removed by the default dh_auto_clean.
[ Daniel Leidert (dale) ]
* debian/watch: Added.
-- Michael Banck <mbanck@debian.org> Sun, 04 Mar 2012 19:50:59 +0100
rdkit (201106+dfsg-1) unstable; urgency=low
* Initial upload (Closes: #640118).
-- Michael Banck <mbanck@debian.org> Sat, 03 Sep 2011 16:14:53 +0200