Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: toppic Upstream-Contact: Xiaowen Liu Source: https://github.com/toppic-suite/toppic-suite Files-Excluded: ext/htslib/* ext/pwiz/* ext/boost/* .gitignore .gitmodules doc/wiki/* Comment: The files were removed because it is possible to find them in Debian packages. Symbolic links were used to replace these removed files. Other files just do not belong in the source tarball. . The directory layout has changed in version 1.5.3 Please check whether these new files need to be excluded: toppic_resources/topmsv/node_modules/file-saver/dist/FileSaver.js toppic_resources/topmsv/node_modules/bootstrap/dist/js/bootstrap.min.js toppic_resources/topmsv/node_modules/popper.js/dist/umd/popper.min.js toppic_resources/topmsv/node_modules/popper.js/dist/popper.min.js toppic_resources/topmsv/node_modules/popper.js/dist/esm/popper.min.js toppic_resources/topmsv/visual/css/FreeMono.ttf . The wiki/* files were removed because they are in the docx format and they pertain better to a website. Files: * Copyright: 2014 - 2021, The Trustees of Indiana University License: Apache-2.0 Apache License Version 2.0 . Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at . http://www.apache.org/licenses/LICENSE-2.0 . Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. . On Debian systems you can read the full text of the Apache 2.0 LICENSE at /usr/share/common-licenses/Apache-2.0.License: Apache-2.0 License: Boost1.0 Boost Software License - Version 1.0 - August 17th, 2003 . Permission is hereby granted, free of charge, to any person or organization obtaining a copy of the software and accompanying documentation covered by this license (the "Software") to use, reproduce, display, distribute, execute, and transmit the Software, and to prepare derivative works of the Software, and to permit third-parties to whom the Software is furnished to do so, all subject to the following: . The copyright notices in the Software and this entire statement, including the above license grant, this restriction and the following disclaimer, must be included in all copies of the Software, in whole or in part, and all derivative works of the Software, unless such copies or derivative works are solely in the form of machine-executable object code generated by a source language processor. . 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See the License for the specific language governing permissions and limitations under the License. License: BSD-like Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: . 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. . 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. . 3. Neither the name of the product nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. . THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. 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Files: ext/xml2json/rapidjson/stream.h ext/xml2json/rapidjson/reader.h ext/xml2json/rapidjson/schema.h ext/xml2json/rapidjson/filewritestream.h ext/xml2json/rapidjson/memorybuffer.h ext/xml2json/rapidjson/document.h ext/xml2json/rapidjson/stringbuffer.h ext/xml2json/rapidjson/encodedstream.h ext/xml2json/rapidjson/internal/ieee754.h ext/xml2json/rapidjson/internal/meta.h ext/xml2json/rapidjson/internal/swap.h ext/xml2json/rapidjson/internal/pow10.h ext/xml2json/rapidjson/internal/biginteger.h ext/xml2json/rapidjson/internal/strfunc.h ext/xml2json/rapidjson/internal/stack.h ext/xml2json/rapidjson/internal/itoa.h ext/xml2json/rapidjson/internal/regex.h ext/xml2json/rapidjson/internal/dtoa.h ext/xml2json/rapidjson/internal/diyfp.h ext/xml2json/rapidjson/internal/strtod.h ext/xml2json/rapidjson/writer.h ext/xml2json/rapidjson/allocators.h ext/xml2json/rapidjson/istreamwrapper.h ext/xml2json/rapidjson/pointer.h ext/xml2json/rapidjson/error/error.h ext/xml2json/rapidjson/error/en.h ext/xml2json/rapidjson/fwd.h ext/xml2json/rapidjson/rapidjson.h ext/xml2json/rapidjson/filereadstream.h ext/xml2json/rapidjson/memorystream.h ext/xml2json/rapidjson/encodings.h ext/xml2json/rapidjson/prettywriter.h ext/xml2json/rapidjson/ostreamwrapper.h Copyright: 2015 THL A29 Limited, a Tencent company, and Milo Yip License: MIT Files: ext/xml2json/xml2json.hpp Copyright: 2013 Alan Zhuang (Cheedoong) Tencent, Inc. 2015 Alan Zhuang (Cheedoong) License: MIT Files: toppic_resources/topmsv/common/save_image/save_image.js Copyright: no holder License: MIT Files: ext/xml2json/rapidxml/* Copyright: 2006, 2007, 2009 Marcin Kalicinski License: Boost1.0 or MIT Files: ext/xml2json/rapidjson/msinttypes/stdint.h ext/xml2json/rapidjson/msinttypes/inttypes.h Copyright: 2006-2013 Alexander Chemeris License: BSD-like Files: ext/fdeep/* Copyright: 2016, Tobias Hermann License: MIT Files: ext/fplus/* Copyright: 2015, Tobias Hermann and the FunctionalPlus contributors License: Boost1.0 Files: ext/fplus/function_traits.hpp Copyright: 2011 kennytm (auraHT Ltd.) License: Boost1.0 Files: src/ms/feature/matrix_inverse.hpp Copyright: not stated License: Presumably-Public-Domain NB: Variations of this file appear in many open source projects, with no copyright claims or license statements made in any of them. Assumed to be public domain, or at least as open as the boost license, since the farthest back we can seem to trace it is the Boost Wiki at http://www.crystalclearsoftware.com/cgi-bin/boost_wiki/wiki.pl?Effective_UBLAS/Matrix_Inversion Files: src/test/catch.hpp Copyright: 2019 Two Blue Cubes Ltd License: Boost1.0 Files: debian/* Copyright: 2020-2022 Filippo Rusconi License: GPL-3+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program. If not, see . On Debian systems, the complete text of the GNU General Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".