libbpp-seq (2.4.1-3) unstable; urgency=medium * Rebuild for new version of gcc to fix symbols Closes: #923954 * Standards-Version: 4.3.0 -- Andreas Tille Thu, 07 Mar 2019 18:56:16 +0100 libbpp-seq (2.4.1-2) unstable; urgency=medium [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. [ Andreas Tille ] * Fix symbols file Closes: #915342 * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright -- Andreas Tille Mon, 03 Dec 2018 08:15:45 +0100 libbpp-seq (2.4.1-1) unstable; urgency=medium [ Julien Dutheil ] * New upstream version Closes: #897784 [ Andreas Tille ] * Standards-Version: 4.2.0 -- Julien Dutheil Sun, 19 Aug 2018 11:45:47 +0200 libbpp-seq (2.4.0-2) unstable; urgency=medium [ Julien Dutheil ] * Provide symbols file only for amd64 [ Andreas Tille ] * Provide full license text of CeCILL license -- Julien Dutheil Sun, 08 Apr 2018 08:04:59 +0200 libbpp-seq (2.4.0-1) unstable; urgency=medium [ Julien Dutheil ] * New upstream version [ Andreas Tille ] * Add symbols file -- Andreas Tille Sun, 25 Mar 2018 14:14:44 +0100 libbpp-seq (2.3.2-1) unstable; urgency=medium [ Julien Dutheil ] * New upstream version [ Andreas Tille ] * Standards-Version: 4.1.3 * cme fix dpkg-control * debhelper 11 -- Julien Dutheil Mon, 05 Feb 2018 17:36:38 +0200 libbpp-seq (2.3.1-8) unstable; urgency=medium * Rebuild with gcc-7 * Standards-Version: 4.0.1 -- Andreas Tille Wed, 23 Aug 2017 19:38:40 +0200 libbpp-seq (2.3.1-7) unstable; urgency=medium [ Julien Dutheil ] * Make tests work on 32 bits archs (enabled position independent code). * Do not override debian default CXX flags. -- Julien Dutheil Wed, 09 Aug 2017 15:54:52 +0200 libbpp-seq (2.3.1-6) unstable; urgency=medium * Increased timeout threshold for Bowker test to pass on all arch. * Removed postins scripts. -- Julien Dutheil Mon, 17 Jul 2017 22:29:29 +0200 libbpp-seq (2.3.1-5) unstable; urgency=medium [ Julien Dutheil ] * Removed unused class VectorProbabilisticSiteContainer [ Andreas Tille ] * debhelper 10 -- Julien Dutheil Thu, 13 Jul 2017 08:52:31 +0200 libbpp-seq (2.3.1-4) unstable; urgency=medium * do not install broken header (Thanks for the patch to Steve Langasek ) Closes: #866069 * d-shlibs (>= 0.80) contains needed override -- Andreas Tille Tue, 27 Jun 2017 08:35:18 +0200 libbpp-seq (2.3.1-3) unstable; urgency=medium * cmake files belong to /usr/lib/$(DEB_HOST_MULTIARCH) Closes: #865529 * hardening=+all * do not ignore test failures * Standards-Version: 4.0.0 (no changes needed) -- Andreas Tille Thu, 22 Jun 2017 21:52:59 +0200 libbpp-seq (2.3.1-2) unstable; urgency=medium * Make sure cmake files will be installed also on i386 -- Andreas Tille Thu, 22 Jun 2017 07:58:04 +0200 libbpp-seq (2.3.1-1) unstable; urgency=medium * New upstream version * d/watch: point to github -- Andreas Tille Tue, 13 Jun 2017 13:35:29 +0200 libbpp-seq (2.2.0-1) unstable; urgency=medium * New upstream version * Packaging moved to Git * Better description * Team maintenance in Debian Med team * Add watch file * debhelper 9 * DEP5 * short dh rules file using d-shlibs * Library transition Closes: #791099 -- Andreas Tille Wed, 13 Apr 2016 15:17:21 +0200 libbpp-seq (2.1.0-1) unstable; urgency=low * 'omics' tools now in bpp-seq-omics * Extended BppO support * StateProperties renamed to AlphabetIndex -- Julien Dutheil Tue, 05 Mar 2013 14:31:00 +0100 libbpp-seq (2.0.3-1) unstable; urgency=low * Bugs fixed in maf parser + new iterators * Added support for GFF * Added support for FastQ * Several bugs fixed -- Julien Dutheil Thu, 09 Feb 2012 14:00:00 +0100 libbpp-seq (2.0.2-1) unstable; urgency=low * RFP: Bio++ -- The Bio++ bioinformatics libraries. (Closes: #616373). * Packages are now non-native. * Bugs fixed in maf parser. -- Julien Dutheil Thu, 09 Jun 2011 11:00:00 +0100 libbpp-seq (2.0.1) unstable; urgency=low * Fixed copyright and rules file. -- Julien Dutheil Mon, 28 Feb 2011 09:00:00 +0100 libbpp-seq (2.0.0) unstable; urgency=low * New source files organization. * More NGS tools: sequence annotations, quality scores, file parsers, etc. -- Julien Dutheil Mon, 07 Feb 2011 09:00:00 +0100 libbpp-seq (1.7.0) unstable; urgency=low * Several bug fixed. Compilation with -Weffc++. * New compressed sites container. * Improved security by changing several pointers to references. -- Julien Dutheil Thu, 25 Mar 2010 10:02:50 +0100 libbpp-seq (1.6.0) unstable; urgency=low * New support for Nexus sequence files. * Update for version 1.8 of Bio++. -- Julien Dutheil Wed, 10 Jun 2009 11:28:58 +0100 libbpp-seq (1.5.0) unstable; urgency=low * Several bugs fixed, new Phred sequence format, speed improvements. -- Julien Dutheil Thu, 11 Dec 2008 12:21:37 +0100 libbpp-seq (1.4.1) unstable; urgency=low * Initial Release. -- Julien Dutheil Mon, 21 Jul 2008 15:17:26 +0200