libpappsomspp (0.9.38-1) unstable; urgency=medium * New upstream version, see below. -- Filippo Rusconi Fri, 19 Jul 2024 16:40:15 +0200 libpappsomspp (0.9.37-1~bookworm+1) bookworm; urgency=medium [ Filippo Rusconi ] * Work on renaming functions and member variables for clarity * Add convenience function getTimsMS2FrameIdsInRtRange() [ Olivier Langella ] * Refactoring TimsData object : definition of 2 components, one for DDA precursors and a new one for DIA slices * New tests added for DDA DIA new API -- Olivier Langella Mon, 15 Jul 2024 13:58:33 +0200 libpappsomspp (0.9.34-1) unstable; urgency=low * Incremental improvements to the handling of Bruker timsTOF data. * Fix bug that failed loading Bruker timsTOF data with a restricting m/z range. * Apply the patch from Gianfranco Costamagna (see 0.9.32-1.1 below. Grazie Gianfranco!). Closes: #1072264. -- Filippo Rusconi Fri, 31 May 2024 11:30:34 +0200 libpappsomspp (0.9.33-1~bookworm+1) bookworm; urgency=medium * Fix for the parallel file loading bug in the MXE cross compiler context -- Olivier Langella Thu, 23 May 2024 13:32:34 +0200 libpappsomspp (0.9.32-1.1) unstable; urgency=medium * Non-maintainer upload (Closes: #-1) * Bump compat level to 13 * Run tests in dh_auto_test target, this should fix tests when nocheck is on * Also export -DBUILD_TESTING=1 variable -- Gianfranco Costamagna Thu, 30 May 2024 11:36:18 +0200 libpappsomspp (0.9.32-1) unstable; urgency=low * New upstream version fixing parallel file-loading bug. -- Filippo Rusconi Tue, 21 May 2024 19:16:44 +0200 libpappsomspp (0.9.31-1) unstable; urgency=low * New upstream with bug fix. * This package does not need t64 transition processing, although it reverse-depends on affected libquazip1-qt6 via odsstream (no changes needed because the required package is a -dev package). -- Filippo Rusconi Thu, 16 May 2024 11:01:17 +0200 libpappsomspp (0.9.30-1~bookworm+1) bookworm; urgency=medium [ Filippo Rusconi ] * New version of dep lib libodsstream; * Speed improvements to the Bruker BafAscii file reader. * Configure build in MXE. * Other small fixes. [ Olivier Langella ] * fix wrong assignment of msrun id in the pwiz reader -- Olivier Langella Wed, 15 May 2024 11:09:54 +0200 libpappsomspp (0.9.29-1~bookworm+1) bookworm; urgency=medium * New package linked to libpwizlite3t64 3.0.6 with HDF5 support -- Olivier Langella Thu, 25 Apr 2024 15:40:48 +0200 libpappsomspp (0.9.28-1~bookworm+1) bookworm; urgency=medium * New package linked to libpwizlite 3.0.6 with HDF5 support -- Olivier Langella Sat, 30 Mar 2024 09:36:23 +0100 libpappsomspp (0.9.27-1~bookworm+1) bookworm; urgency=medium * bypass tandemwrapper for tandemng2015p -- Olivier Langella Fri, 29 Mar 2024 13:28:27 +0100 libpappsomspp (0.9.26-1~bookworm+1) bookworm; urgency=medium * bypass tandemwrapper for tandemng2015 -- Olivier Langella Tue, 26 Mar 2024 15:04:30 +0100 libpappsomspp (0.9.25-1~bookworm+1) bookworm; urgency=medium [ Olivier Langella ] * Experimental tests on protein alignments [ Filippo Rusconi ] * Bruker Baf to Ascii support -- Olivier Langella Thu, 29 Feb 2024 14:53:10 +0100 libpappsomspp (0.9.24-1) unstable; urgency=low * New upstream version fixing problem with ion mobility values in different vendor format files. -- Filippo Rusconi Tue, 13 Feb 2024 19:37:12 +0100 libpappsomspp (0.9.23-1) unstable; urgency=low * New upstream release. -- Filippo Rusconi Wed, 07 Feb 2024 14:37:05 +0100 libpappsomspp (0.9.22-1~bookworm+1) bookworm; urgency=medium [ Olivier Langella ] * PSI-MOD obo file updated to latest version PSI-MOD version: 1.031.6 * Get PSI-MS data file format from MsDataFormat enumeration * Experimental stuff to code protein sequence in integers [ Filippo Rusconi ] * New combiners * Refactoring plot widgets * Rename MzFormat enumaration to MsDataFormat * Replaced the SelectionPolygon by IntegrationScope -- Olivier Langella Tue, 30 Jan 2024 11:21:23 +0100 libpappsomspp (0.9.21-1~bookworm+1) bookworm; urgency=medium * Integration of the Spectree algorithm described in https://doi.org/10.1021/acs.jproteome.7b00308 -- Olivier Langella Wed, 20 Dec 2023 12:14:38 +0100 libpappsomspp (0.9.20-1) unstable; urgency=low * New upstream version. See git log. * Update libodsstream-dev (>= 0.9.6). * Standards-Version: 4.6.2. -- Filippo Rusconi Mon, 04 Dec 2023 22:25:25 +0100 libpappsomspp (0.9.19-1~bookworm+1) bookworm; urgency=medium [ Olivier Langella ] * Update dependency to new version of odsstream. * SpecGlobX algorithm added in processing/specglob/* * all tests are now under a single catch2. or catch3.x binary * HUPO-SI ProForma peptide notation support added [ Filippo Rusconi ] * fix Bruker data read process regarding mz range definition -- Olivier Langella Mon, 04 Dec 2023 09:23:08 +0100 libpappsomspp (0.9.18-1) unstable; urgency=low * New upstream version. * Update dependency to new version of odsstream. * Fixes to the test files that use Catch2 (header inclusion changed between version 2.x and 3.x.). * Note that this version does compile with the experimental/libboost1.83.0 libs, and tests run flawlessly, which means we can safely (Closes: #1056098). -- Filippo Rusconi Sat, 18 Nov 2023 22:44:09 +0100 libpappsomspp (0.9.17-1) unstable; urgency=low * Fixes (hopefully) to tests that failed under some platforms. This entailed using some tolerance in the way double values are compared. -- Filippo Rusconi Tue, 29 Aug 2023 12:42:55 +0200 libpappsomspp (0.9.16-1) unstable; urgency=low * New upstream version trying to explore the test run failures observed on other platforms than amd64. Namely, the fact that Catch2-based tests are run using dh_test as a single test with no meaningful output to check why it fails. -- Filippo Rusconi Mon, 28 Aug 2023 10:15:05 +0200 libpappsomspp (0.9.15-1) unstable; urgency=low * Force new upstream to upload tar.gz. -- Filippo Rusconi Fri, 25 Aug 2023 12:29:38 +0200 libpappsomspp (0.9.14-1) unstable; urgency=low * WIP: allow the possibility to configure the loading process for Bruker timsTOF data files. * Packaging for Debian unstable. * Make tests build and run fine in d/rules. Required working on tests/CMakeLists.txt to change LD_LIBRARY_PATH to the catch2 based test binary. -- Filippo Rusconi Thu, 24 Aug 2023 14:27:24 +0200 libpappsomspp (0.9.14-1~bookworm+1) bookworm; urgency=medium * bug fix on new Peptide::addAaModificationOnAllAminoAcid function used for C13N15 labeling -- Olivier Langella Thu, 24 Aug 2023 13:08:56 +0200 libpappsomspp (0.9.13-1) unstable; urgency=low * Fix missing cstdint include. -- Filippo Rusconi Mon, 21 Aug 2023 19:36:58 +0200 libpappsomspp (0.9.13-1~bookworm+1) bookworm; urgency=medium [ Olivier Langella ] * tests for C13N15 methods * implementation of distance between traces based on the similarity cosine method [ Filippo Rusconi ] * implementation of C13N15 internal controled vocabulary * WIP: redesigning API for much flexible msrun reader -- Olivier Langella Wed, 19 Jul 2023 15:03:01 +0200 libpappsomspp (0.9.12-1) unstable; urgency=low * Nothing new, just keeping up with version numbering... See version 0.9.10-1 for details. -- Filippo Rusconi Tue, 20 Jun 2023 15:55:08 +0200 libpappsomspp (0.9.11-1~bookworm+1) bookworm; urgency=medium * new bookworm package -- Olivier Langella Fri, 16 Jun 2023 17:48:45 +0200 libpappsomspp (0.9.10-1~bullseye+1) bullseye; urgency=medium * work on PSM features -- Olivier Langella Thu, 04 May 2023 15:33:21 +0200 libpappsomspp (0.9.10-1) unstable; urgency=low * New upstream version fixing odd bug with fabs() required when a double value is negative (determination of the decimals required to display values in the traces upon measurement of inter-peak distances). * Indirectly fix the #include that was missing in libpwizlite and that made build failures with new g++-13 (Closes: #1037734). * libpwizlite-dev (>= 3.0.5) version dependency update. -- Filippo Rusconi Thu, 27 Apr 2023 17:13:46 +0200 libpappsomspp (0.9.9-1) unstable; urgency=medium * minX and maxX on trace -- Olivier Langella Fri, 17 Mar 2023 16:25:31 +0100 libpappsomspp (0.9.7-1) bullseye; urgency=medium * Full Qt6 switch -- Olivier Langella Fri, 17 Mar 2023 13:14:07 +0100 libpappsomspp (0.9.6-1) unstable; urgency=low * New upstream. Last chance to upload before the freeze. -- Filippo Rusconi Mon, 13 Feb 2023 13:30:40 +0100 libpappsomspp (0.9.5-1~bullseye+1) bullseye; urgency=medium * new IonMobilityGrid object to align mobility between runs -- Olivier Langella Wed, 01 Feb 2023 10:44:41 +0100 libpappsomspp (0.9.4-1~bullseye+1) bullseye; urgency=medium * merge qt6 branch developments. * replace libalglib polynome solver with a Cardano's implementation, to improve CPU performances. Thanks to "Sergey Bochkanov" for the advice. -- Olivier Langella Thu, 05 Jan 2023 11:43:45 +0100 libpappsomspp (0.9.3-1) unstable; urgency=low * New upstream version with code cleanup; * Remove version constraints on the build-deps packages (thanks Janitor). * Made BasePlotContext a true base class for MassSpecTraceplotContext. * Hopefully fix bug (Closes: #1027554). Thanks to Lucas Nussbaum () for reporting it. Note that the software builds fine uncorrected in a chroot sid environment. -- Filippo Rusconi Sun, 01 Jan 2023 16:24:07 +0100 libpappsomspp (0.9.2-1) unstable; urgency=low * New upstream fixing small glitches and setting bumped-up version for libodsstream-dev as a build-dep package. -- Filippo Rusconi Wed, 14 Dec 2022 13:42:23 +0100 libpappsomspp (0.9.1-2) unstable; urgency=low * Started implementing a MS run reader that combines all the mobility scans into a single mass spectrum. This way, mineXpert2 can load Bruker timsTOF data in a pretty reasonable time. * Other improvements and fixes to the Qt6 port. -- Filippo Rusconi Tue, 13 Dec 2022 17:57:07 +0100 libpappsomspp (0.9.0-1) unstable; urgency=low * Comment for FTPMasters: this source package is only different than the previous one by the name of the binary packages that it creates. * New version that builds against Qt6. * Other improvements and fixes in the CMake-based build system. * Standards-Version: 4.6.0 (routine update). -- Filippo Rusconi Thu, 24 Nov 2022 23:23:37 +0100 libpappsomspp (0.8.61-1~bullseye+1) bullseye; urgency=medium * cmake rework * merging qt6 branch * use qcustomplot 2.1 library -- Olivier Langella Wed, 30 Nov 2022 11:11:58 +0100 libpappsomspp (0.8.60-1~bullseye+1) bullseye; urgency=medium * bullseye backport -- Olivier Langella Mon, 31 Oct 2022 09:06:33 +0100 libpappsomspp (0.8.60-1) unstable; urgency=low * Fix the distribution... was working too late at night... -- Filippo Rusconi Fri, 28 Oct 2022 10:20:12 +0200 libpappsomspp (0.8.59-1) bullseye; urgency=low * New upstream version. * Incidentally, previous version was to fix a bug that was published in betwwen the previous version and this one: (Closes: #1022934). -- Filippo Rusconi Fri, 28 Oct 2022 03:30:29 +0200 libpappsomspp (0.8.58-1) bullseye; urgency=low * New upstream version (see 0.8.57-1~bullseye+1). * Standards-Version: 4.6.1. * d/rules: Fix by Adrian Bunk to work around the excess precision of the x87 FPU that causes https://buildd.debian.org/status/logs.php?pkg=libpappsomspp&arch=i386. -- Filippo Rusconi Thu, 27 Oct 2022 10:38:00 +0200 libpappsomspp (0.8.57-1~bullseye+1) bullseye; urgency=medium [ Olivier Langella ] * avoid nullptr calls in custom plot widgets * new tims frame widget color map * better tdf handler * new tests for protein , enzyme, psm, psmfeaures * new psm feature API [ Filippo Rusconi ] * refactoring work to compile using Qt6 -- Olivier Langella Tue, 04 Oct 2022 17:02:43 +0200 libpappsomspp (0.8.56-1) unstable; urgency=low * New version that implements features in the dt|rt,m/z color map realms. -- Filippo Rusconi Tue, 30 Aug 2022 14:54:53 +0200 libpappsomspp (0.8.55-1) unstable; urgency=low * New version to fix the destination distribution. -- Filippo Rusconi Mon, 11 Jul 2022 13:06:19 +0200 libpappsomspp (0.8.54-1) bullseye; urgency=low * New upstream release fixing bug in color map plot panning when any axis is locked (Filippo Rusconi). * d/control: bump-up dependency for odsstream to 0.8.1. -- Filippo Rusconi Fri, 08 Jul 2022 15:52:47 +0200 libpappsomspp (0.8.53-1~bullseye+1) bullseye; urgency=medium * fix for issue #17 in MassChroQ -- Olivier Langella Thu, 30 Jun 2022 13:40:16 +0200 libpappsomspp (0.8.52-1) unstable; urgency=low * New upstream version fixing one critical bug in the calculation of the decimals in a value (infinite loop). -- Filippo Rusconi Wed, 29 Jun 2022 20:12:33 +0200 libpappsomspp (0.8.51-1~bullseye+2) bullseye; urgency=medium * fix for issue #11 -- Olivier Langella Thu, 23 Jun 2022 13:19:23 +0200 libpappsomspp (0.8.51-1~bullseye+1) bullseye; urgency=medium * tdf reader enhancements -- Olivier Langella Wed, 22 Jun 2022 09:42:32 +0200 libpappsomspp (0.8.50-1) unstable; urgency=low * New upstream version. -- Filippo Rusconi Fri, 17 Jun 2022 10:23:51 +0200 libpappsomspp (0.8.49-1) unstable; urgency=medium * New upstream release. -- Filippo Rusconi Tue, 15 Mar 2022 16:42:27 +0100 libpappsomspp (0.8.49-1~bullseye+1) bullseye; urgency=medium * mzdata conversion time displayed in tandemwrapper * new package using libpwizlite 3.0.4 -- Olivier Langella Sun, 13 Mar 2022 17:52:32 +0100 libpappsomspp (0.8.48-1) unstable; urgency=low * New upstream version with new features from Olivier Langella (see stanzas below) and Filippo Rusconi (mainly a new low intensity threshold removal filter). -- Filippo Rusconi Mon, 31 Jan 2022 16:00:07 +0100 libpappsomspp (0.8.47-1~bullseye+1) bullseye; urgency=medium * new msrun alignment API -- Olivier Langella Wed, 26 Jan 2022 09:20:02 +0100 libpappsomspp (0.8.46-1~bullseye+1) bullseye; urgency=medium * XML stream reader also reads from a QString -- Olivier Langella Mon, 24 Jan 2022 14:47:52 +0100 libpappsomspp (0.8.45-1~bullseye+1) bullseye; urgency=medium * fix xml stream reader emty string problem * fix tdf filename and sample name * better filter suite string and iterators * more efficient multithreaded xic extraction * mzformat is written into tandem result file -- Olivier Langella Sun, 02 Jan 2022 17:10:58 +0100 libpappsomspp (0.8.44-1~bullseye+1) bullseye; urgency=medium * fix quantile on trace size equal 0 -- Olivier Langella Tue, 21 Dec 2021 13:03:26 +0100 libpappsomspp (0.8.43-1~bullseye+1) bullseye; urgency=medium * fix fragment ion name API design * new filter to remove intensity using a quantile function : implementation and tests -- Olivier Langella Tue, 21 Dec 2021 08:44:14 +0100 libpappsomspp (0.8.42-1~bullseye+1) bullseye; urgency=medium * better peptide fragment ion names for phopho acid loss * rework of alignment API -- Olivier Langella Thu, 16 Dec 2021 12:05:31 +0100 libpappsomspp (0.8.41-1~bullseye+1) bullseye; urgency=medium [ Olivier Langella ] * remove pseudo centroid filter and remaining pwiz files * fix C12 abundance * parallelized xic extractor * better XML error handler * better ion names in mass spectrum widget * fix tandem wrapper and new tests [ Filippo Rusconi ] * improvements to the documentation and comments * convenient function to insert/update datapoints in traces * new tests (xic chromatogram and xic extractor to mass spectrum) -- Olivier Langella Sat, 11 Dec 2021 11:13:39 +0100 libpappsomspp (0.8.40-1~bullseye+1) bullseye; urgency=medium * new bullseye package -- Olivier Langella Tue, 23 Nov 2021 08:52:11 +0100 libpappsomspp (0.8.39-1~bullseye+2) bullseye; urgency=medium * new bullseye package -- Olivier Langella Mon, 22 Nov 2021 14:56:09 +0100 libpappsomspp (0.8.39-1) unstable; urgency=low * New upstream version (see below). * Fixes to the build by adding #include where required (build with g++ v 11.2.0). Many thanks to Adrian Bunk for the patch (although not applied as-is). Closes: #984199. * Bump-up Standards to 4.6.0 * Add watch file that points to the forgemia GitLab repos instance. -- Filippo Rusconi Wed, 10 Nov 2021 16:32:10 +0100 libpappsomspp (0.8.38-1~buster+1) buster; urgency=medium * essential function to allow compression type 1 XIC extraction -- Olivier Langella Sun, 07 Nov 2021 09:01:21 +0100 libpappsomspp (0.8.37-1~buster+1) buster; urgency=medium [ Olivier Langella ] * more exceptions concerning timsTOF data reader for better reliability * support for the timsTOF compression type 1 (legacy data files) and tests * better tandemrunwrapper [ Filippo Rusconi ] * improvements to the filters * better mz integration tests -- Olivier Langella Fri, 05 Nov 2021 16:11:09 +0100 libpappsomspp (0.8.36-1~buster+1) buster; urgency=medium * fix a new peak detection crash on small XICs, tests added -- Olivier Langella Thu, 30 Sep 2021 09:14:00 +0200 libpappsomspp (0.8.35-1~buster+1) buster; urgency=medium [ Olivier Langella ] * fix peak detection crash on small XICs, tests added [ Filippo Rusconi ] * better plot widget color map * new function in filter name interface to get the name of the filter -- Olivier Langella Tue, 28 Sep 2021 09:27:45 +0200 libpappsomspp (0.8.34-1~buster+1) buster; urgency=medium * new text user interface monitor to display progress using percent * new function to add filters from QStrings in a filter suite -- Olivier Langella Mon, 27 Sep 2021 09:29:36 +0200 libpappsomspp (0.8.33-1~buster+1) buster; urgency=medium * fix out of range possible access when extracting XIC on tims data * new trace peak vector and convenient API to choose matched peaks -- Olivier Langella Mon, 20 Sep 2021 15:40:38 +0200 libpappsomspp (0.8.32-1~buster+1) buster; urgency=medium * msrun reader collection handler refactoring * better reader performance on timstof data * special API for MassChroQ -- Olivier Langella Wed, 15 Sep 2021 11:30:24 +0200 libpappsomspp (0.8.31-1~buster+1) buster; urgency=medium * new widget to handle a switch button, Thomas Renne -- Olivier Langella Tue, 24 Aug 2021 15:59:55 +0200 libpappsomspp (0.8.30-1~buster+1) buster; urgency=medium * fix QProcess mecanism to execute tandem -- Olivier Langella Wed, 23 Jun 2021 10:35:48 +0200 libpappsomspp (0.8.29-1~buster+1) buster; urgency=medium * issue #9 fixed : conversion problem between uint and ulong * better memory management in TIMS frame decoder -- Olivier Langella Thu, 03 Jun 2021 07:54:59 +0200 libpappsomspp (0.8.28-1~buster+1) buster; urgency=medium * new TandemRunWrapper, runs on any mz data file * generic UiMonitorInterface to manage long process * X!Tandem error management -- Olivier Langella Thu, 20 May 2021 10:14:29 +0200 libpappsomspp (0.8.27-1~buster+1) buster; urgency=medium * binary package for PAPPSO repository -- Olivier Langella Wed, 12 May 2021 18:14:27 +0200 libpappsomspp (0.8.26-2) buster; urgency=medium * new tandem run wrapper API -- Olivier Langella Wed, 12 May 2021 17:14:27 +0200 libpappsomspp (0.8.26-1) buster; urgency=medium * new XIC extraction API, enabling ion mobility -- Olivier Langella Thu, 06 May 2021 14:34:14 +0200 libpappsomspp (0.8.25-2) unstable; urgency=low * New upload with orig.tar.gz. The buster version by Olivier made dpkg think this was not a version needing orig.tar.gz. -- Filippo Rusconi Wed, 21 Apr 2021 22:21:44 +0200 libpappsomspp (0.8.25-1) unstable; urgency=low * New upstream version with new noise reduction features for the color maps. -- Filippo Rusconi Wed, 21 Apr 2021 15:59:49 +0200 libpappsomsp (0.8.25-1~buster+1) buster; urgency=medium * widgets to handle OBO terms -- Olivier Langella Wed, 21 Apr 2021 14:40:23 +0200 libpappsomspp (0.8.24-1) unstable; urgency=low * New upstream version. -- Filippo Rusconi Thu, 08 Apr 2021 09:54:26 +0200 libpappsomspp (0.8.23-1~buster+1) buster; urgency=medium * mass spectrum widget API modified to highlight precursor -- Olivier Langella Thu, 01 Apr 2021 14:24:04 +0200 libpappsomspp (0.8.23-1) unstable; urgency=low * The tests that failed in i386 could not be fixed for some reason. However, the software is working fine as tested in a VirtualBox environment of i386. The failing tests are conditionally dropped for i386. -- Filippo Rusconi Wed, 31 Mar 2021 14:28:43 +0200 libpappsomspp (0.8.22-1) unstable; urgency=low * Rewrite the Trace::containsX() function so that it passes the i386-based tests. All tests pass on an i386 VirtualBox-based testing Debian box. -- Filippo Rusconi Tue, 30 Mar 2021 10:18:36 +0200 libpappsomspp (0.8.21-1) unstable; urgency=low * Try to fix the build failures on i386 platforms due to double precision varying on 32 bits vs 64 bits platforms. -- Filippo Rusconi Mon, 29 Mar 2021 14:14:24 +0200 libpappsomspp (0.8.20-1) unstable; urgency=low * New upstream version with all the integration region selection reworked to cope with the specific case of integration skewed selection rectangle. * Add d/not-installed to list uninstalled files (those that are shipped as symbolic links). * Build-Depends: debhelper-compat (= 13). -- Filippo Rusconi Tue, 23 Mar 2021 17:01:09 +0100 libpappsomspp (0.8.19-1~buster+1) buster; urgency=medium * new test to control memory usage * no cache in mzcalibration timstof model * XIC shared pointer initialization in timstof reader -- Olivier Langella Wed, 03 Mar 2021 16:30:53 +0100 libpappsomspp (0.8.18-1) unstable; urgency=low * New upstream version (see below). * Fixed a bunch of QT DEPRECATED warnings. * Standards-Version: 4.5.1 (no changes needed). -- Filippo Rusconi Thu, 25 Feb 2021 06:21:37 +0100 libpappsomspp (0.8.17-1~buster+1) buster; urgency=medium * tandemrunwrapper memory leak problem fixed * first working version of a TimsTofPRO XIC extractor * new test for tandemrunwrapper, TimsTofPROT xic extraction -- Olivier Langella Tue, 23 Feb 2021 09:26:43 +0100 libpappsomspp (0.8.16-1~buster+2) buster; urgency=medium * TimsData reader performance enhancements * changing isotope natural abundance to use the massXpert definitions * DeepProt enumerations for controlled vocabulary across PAPPSO software * enabling test execution in debian package process -- Olivier Langella Thu, 28 Jan 2021 11:46:15 +0100 libpappsomspp (0.8.16-1~buster+1) buster; urgency=medium * development package -- Olivier Langella Fri, 22 Jan 2021 13:22:56 +0100 libpappsomspp (0.8.15-1) unstable; urgency=low * New upstream version depending on libodsstream 0.7.11. * Disable make test for the moment. -- Filippo Rusconi Mon, 21 Dec 2020 18:05:07 +0100 libpappsomspp (0.8.14-1~buster+1) buster; urgency=medium * catch2 test suite is working * fix for standard exception compatibility -- Olivier Langella Wed, 16 Dec 2020 14:00:13 +0100 libpappsomspp (0.8.13-1~buster+1) buster; urgency=medium * buster package -- Olivier Langella Wed, 09 Dec 2020 15:36:32 +0100 libpappsomspp (0.8.13-1) unstable; urgency=low * New upstream with improvement in the XIC widgets. -- Filippo Rusconi Tue, 08 Dec 2020 16:29:03 +0100 libpappsomspp (0.8.12-1) UNRELEASED; urgency=low * New upstream version with new tests imported from mineXpert2 (Catch2-based). * See below for changes between 0.8.8 and now. -- Filippo Rusconi Wed, 02 Dec 2020 14:28:10 +0100 libpappsomspp (0.8.11-1~buster+1) buster; urgency=medium * test added * bug fix in chargeDeconvolution filter * including catch2 framework -- Olivier Langella Tue, 24 Nov 2020 10:08:59 +0100 libpappsomspp (0.8.10-1~buster+1) buster; urgency=medium * better tandemrun wrapper * better FilterSuiteString -- Olivier Langella Wed, 18 Nov 2020 10:13:20 +0100 libpappsomspp (0.8.9-1~buster+1) buster; urgency=medium * rewritten TimsTOF mz calibration API * new FilterNameInterface to build Filter with strings * Thomas Renne added in the copyright debian notice -- Olivier Langella Tue, 17 Nov 2020 13:31:57 +0100 libpappsomspp (0.8.8-1~buster+1) buster; urgency=medium * autoremove directory created for tandem run wrapper -- Olivier Langella Mon, 02 Nov 2020 10:50:32 +0100 libpappsomspp (0.8.8-1) unstable; urgency=low * Add the possibility to recalculate the x,y,z axis scale to log10 or linear. -- Filippo Rusconi Wed, 21 Oct 2020 14:29:32 +0200 libpappsomspp (0.8.7-1~buster+1) buster; urgency=medium * make new builtin centroid interface available throught TimsMsRunReader * access to the underlying timdata pointer from TimsMsRunReader -- Olivier Langella Thu, 15 Oct 2020 09:14:24 +0200 libpappsomspp (0.8.6-1~buster+1) buster; urgency=medium * builtin centroid for timsdata -- Olivier Langella Wed, 14 Oct 2020 10:22:37 +0200 libpappsomspp (0.8.5-1~buster+1) buster; urgency=medium * more checks on file permissions for tandem run wrapper * charge deconvolution documented -- Olivier Langella Fri, 09 Oct 2020 15:37:09 +0200 libpappsomspp (0.8.4-1~buster+1) buster; urgency=medium * new charge deconvolution filter -- Olivier Langella Thu, 08 Oct 2020 10:52:40 +0200 libpappsomspp (0.8.3-1~buster+1) buster; urgency=medium * better msrunreader error messages * regorganised xic extractor to ensure that device is released -- Olivier Langella Mon, 05 Oct 2020 10:19:53 +0200 libpappsomspp (0.8.2-1) buster; urgency=low [ Filippo Rusconi ] * Fixes in the minus combiners. -- Filippo Rusconi Wed, 23 Sep 2020 15:22:50 +0200 libpappsomspp (0.8.2-1~buster+1) buster; urgency=medium * msrunreader new api to release/acquire file pointers -- Olivier Langella Fri, 25 Sep 2020 15:07:16 +0200 libpappsomspp (0.8.1-1) unstable; urgency=low * Fix bug due to not testing pointer against nullptr. -- Filippo Rusconi Mon, 21 Sep 2020 17:20:31 +0200 libpappsomspp (0.8.0-1) UNRELEASED; urgency=low * Add MSn support. -- Filippo Rusconi Mon, 21 Sep 2020 15:53:13 +0200 libpappsomspp (0.7.15-1) unstable; urgency=low * Attempt at fixing the test/test_massrange.cpp failure in i386 platforms. -- Filippo Rusconi Thu, 10 Sep 2020 18:07:48 +0200 libpappsomspp (0.7.14-1) unstable; urgency=low * Bug fix in DataPoint initialization using initialize(). -- Filippo Rusconi Wed, 02 Sep 2020 10:23:48 +0200 libpappsomspp (0.7.14-1~buster+1) buster; urgency=medium * new filters : FilterComplementIonEnhancer, FilterGreatestYperWindow, FilterRemoveC13 -- Olivier Langella Thu, 27 Aug 2020 10:36:53 +0200 libpappsomspp (0.7.13-1) unstable; urgency=low * Another set of fixes for the faulty hard-coded path to the arch-specific system library directory. -- Filippo Rusconi Tue, 25 Aug 2020 13:13:48 +0200 libpappsomspp (0.7.12-1) unstable; urgency=low * Add new filter. -- Filippo Rusconi Mon, 24 Aug 2020 19:42:19 +0200 libpappsomspp (0.7.11-1) unstable; urgency=low * Fix problem with the shipped CMake-based config module file that was replaced with a find module file that has no path hard-coded in it. This should fix the failed builds on all the non x86_64 platforms. -- Filippo Rusconi Mon, 24 Aug 2020 15:45:21 +0200 libpappsomspp (0.7.11-1~buster+1) buster; urgency=medium * fix MassSpectrumWidget issue #3 -- Olivier Langella Mon, 17 Aug 2020 15:52:06 +0200 libpappsomspp (0.7.10-1~buster+1) buster; urgency=medium * buster package -- Olivier Langella Wed, 22 Jul 2020 11:04:12 +0200 libpappsomspp (0.7.10-1) unstable; urgency=low * New upstream version. Added new widget class to represent mass data to a TIC|XIC chromatogram / drift spectrum color map as requested by a user. * Updates to the packaging. -- Filippo Rusconi Thu, 09 Jul 2020 09:26:14 +0200 libpappsomspp (0.7.9-1~buster+1) buster; urgency=medium * new version for debian buster pappsodev -- Olivier Langella Wed, 01 Jul 2020 18:49:18 +0200 libpappsomspp (0.7.8-1~buster+1) buster; urgency=medium * Debian buster backport -- Olivier Langella Wed, 10 Jun 2020 17:04:05 +0200 libpappsomspp (0.7.8-1) unstable; urgency=low * New upstream that has the src/custompwiz source directory removed. This lib now build-depends on another package: libpwizlite-dev. * d/copyright was updated to reflect the removal of the pwiz code subset. Note that 3 files were kept, modified and relocated to the pappsomspp source tree. These were documented in d/copyright. -- Filippo Rusconi Thu, 04 Jun 2020 18:21:53 +0200 libpappsomspp (0.7.7-2) buster; urgency=medium * packaging problem fixed -- Olivier Langella Tue, 19 May 2020 15:47:42 +0200 libpappsomspp (0.7.7-1) buster; urgency=medium * a lot of warnings fixed, better virtual destructors -- Olivier Langella Mon, 18 May 2020 10:31:35 +0200 libpappsomspp (0.7.6-1) UNRELEASED; urgency=low * Fixes for the CMake build system. -- Filippo Rusconi Tue, 28 Apr 2020 18:03:15 +0200 libpappsomspp (0.7.5-1) unstable; urgency=low * New upstream version with fixex for Qt5 suffix remnants within CMake stuff. Also, use better name for the libs in the CMake dialect (PAPPSOMSPP becomes PappsoMSpp). -- Filippo Rusconi Tue, 28 Apr 2020 16:35:52 +0200 libpappsomspp (0.7.4-1) unstable; urgency=low * New upstream version with MultiArch support. * General review of the packaging for Debian official repos upload. * Full copyright holders info in d/copyright. -- Filippo Rusconi Wed, 22 Apr 2020 10:14:26 +0200 libpappsomspp (0.7.3-2) buster; urgency=medium * no more global include directories in cmake to fix compilation problems -- Olivier Langella Mon, 20 Apr 2020 09:08:55 +0200 libpappsomspp (0.7.3-1) buster; urgency=medium * new system to export symbols for Windows system * filter pseudo centroid -- Olivier Langella Wed, 15 Apr 2020 08:02:58 +0200 libpappsomspp (0.7.2-3) buster; urgency=medium * important fix in timsframe polynomial resolution -- Olivier Langella Sun, 12 Apr 2020 16:57:34 +0200 libpappsomspp (0.7.2-2) buster; urgency=medium * fix pappsomsconfig generation and install -- Olivier Langella Fri, 10 Apr 2020 19:36:54 +0200 libpappsomspp (0.7.2-1) buster; urgency=medium * reworked cmake stuff -- Olivier Langella Fri, 10 Apr 2020 10:26:45 +0200 libpappsomspp (0.7.1-1) buster; urgency=medium * brand new library, including libpwiz to avoid compilation problems -- Olivier Langella Wed, 08 Apr 2020 18:26:53 +0200 libpappsomspp (0.7.0-1) unstable; urgency=low * New packaging for testing Debian sid package creation. -- Filippo Rusconi Sat, 18 Jan 2020 21:05:02 +0100 libpappsomspp (0.6.5-1ubuntu1) bionic; urgency=medium * ubuntu 18.04 package -- Olivier Langella Fri, 10 Jan 2020 21:59:22 +0000 libpappsomspp (0.6.5-1) buster; urgency=medium * catch pwiz runtime error * set scans number for mzXML files -- Olivier Langella Wed, 08 Jan 2020 20:50:05 +0100 libpappsomspp (0.6.4-1) buster; urgency=medium * a lot of development from Filippo Rusconi and Olivier Langella -- Olivier Langella Thu, 19 Dec 2019 21:55:55 +0100 libpappsomspp (0.6.3-2) buster; urgency=medium * buster package -- Olivier Langella Thu, 12 Sep 2019 15:23:58 +0200 libpappsomspp (0.6.3-1) stretch; urgency=medium * better BaseTracePlotWidget * new callback function to cancel msrunreader operation * new set of objects to handle Bruker's Tims TOF raw data natively * new MsRunReaders for Bruker's Tims TOF raw data (incomplete) -- Olivier Langella Wed, 11 Sep 2019 09:57:57 +0200 libpappsomspp (0.6.2-1) buster; urgency=medium * first buster package * new BaseTracePlotWidget designed by Filippo Rusconi * FastaFileIndexer object * new function hasScanNumbers to know if an MSrun file can be accessed using scan numbers (true with Thermo, false with others) * peptide palindrome test * new code to compute natural isotope average * new constructor Trace(const MapTrace &map_trace) to build directly a Trace from MapTrace -- Olivier Langella Tue, 16 Jul 2019 14:23:52 +0200 libpappsomspp (0.6.1-1) stretch; urgency=medium * huge refactoring with Filippo Rusconi * work in progress to define a tree structure and browse MS runs * new object and API to align MS runs using the MS2 method -- Olivier Langella Sat, 08 Jun 2019 19:29:09 +0200 libpappsomspp (0.6.0-1) stretch; urgency=medium * huge refactoring with Filippo Rusconi * all filters now available on a Trace object with a simple interface * peak detection as a new simple interface that can be used on any Trace * new feature to combine several traces or mass spectrum * mass spectrum scan numbers are deprecated in favor of a simple index of the scan * a new msfile accessor is available to handle multiple ms runs into a single file -- Olivier Langella Thu, 23 May 2019 11:00:11 +0200 libpappsomspp (0.5.1-1) stretch; urgency=medium * better packaging * mutation support -- Olivier Langella Sat, 23 Mar 2019 07:27:31 +0100 libpappsomspp (0.5.0-1) stretch; urgency=medium * library entirely refactored with Filippo Rusconi * better documentation * coding standards available -- Olivier Langella Wed, 06 Feb 2019 10:27:13 +0100 libpappsomspp (0.4.5-1) stretch; urgency=medium * new package with graphical bug fix -- Olivier Langella Tue, 08 Jan 2019 15:49:32 +0100 libpappsomspp (0.4.4-5) stretch; urgency=medium * new pwiz library -- Olivier Langella Wed, 02 Jan 2019 21:24:24 +0100 libpappsomspp (0.4.4-3) stretch; urgency=medium * new qcustomplot library 2.0.1 -- Olivier Langella Tue, 11 Dec 2018 19:07:06 +0100 libpappsomspp (0.4.4-1) unstable; urgency=low * Packaging for first upload to the NEW queue. -- Filippo Rusconi Tue, 11 Dec 2018 11:06:34 +0100 libpappsomspp (0.4.3-2) stretch; urgency=medium * fix MGF precursor scan num empty -- Olivier Langella Fri, 02 Nov 2018 13:44:50 +0100 libpappsomspp (0.4.3-1) stretch; urgency=medium * new buffered XIC reader based on pwiz library -- Olivier Langella Tue, 14 Aug 2018 14:27:31 +0200 libpappsomspp (0.4.2-1) stretch; urgency=medium * new API to read MSrun data -- Olivier Langella Sat, 02 Jun 2018 07:12:31 +0200 libpappsomspp (0.4.1-1) stretch; urgency=medium * new xic extractor based on slices and having a read buffer -- Olivier Langella Thu, 24 May 2018 19:24:13 +0200 libpappsomspp (0.4.0-2) stretch; urgency=medium * fix out of range problem -- Olivier Langella Thu, 17 May 2018 22:01:40 +0200 libpappsomspp (0.4.0-1) stretch; urgency=medium * new XIC extractor API and new dependency to proteowizard library -- Olivier Langella Wed, 16 May 2018 09:34:30 +0200 libpappsomspp (0.3.4-1) stretch; urgency=medium * API to draw peak borders -- Olivier Langella Sat, 14 Apr 2018 17:29:13 +0200 libpappsomspp (0.3.3-3) stretch; urgency=medium * fix cmake config module -- Olivier Langella Mon, 12 Feb 2018 09:13:16 +0100 libpappsomspp (0.3.3-2) stretch; urgency=medium * using new libodsstream package -- Olivier Langella Sun, 11 Feb 2018 16:54:30 +0100 libpappsomspp (0.3.3-1) stretch; urgency=medium * better widgets -- Olivier Langella Fri, 09 Feb 2018 15:57:58 +0100 libpappsomspp (0.3.2-1) stretch; urgency=medium * new XIC widget -- Olivier Langella Thu, 18 Jan 2018 15:54:09 +0100 libpappsomspp (0.3.1-1) stretch; urgency=medium * new precision widget, better spectrum widget -- Olivier Langella Wed, 10 Jan 2018 14:06:33 +0100 libpappsomspp (0.3.0-3) stretch; urgency=medium * avoid unneeded computations -- Olivier Langella Wed, 03 Jan 2018 09:10:46 +0100 libpappsomspp (0.3.0-2) stretch; urgency=medium * isotope number instead of level -- Olivier Langella Tue, 02 Jan 2018 17:00:11 +0100 libpappsomspp (0.3.0-1) stretch; urgency=medium * new PAPPSO widget package -- Olivier Langella Tue, 02 Jan 2018 10:48:10 +0100 libpappsomspp (0.2.40-1) stretch; urgency=medium * faster grouping algorithm, refactoring -- Olivier Langella Sun, 17 Dec 2017 14:05:18 +0100 libpappsomspp (0.2.39-1) stretch; urgency=medium * better perf in grouping algorithm -- Olivier Langella Fri, 15 Dec 2017 10:06:14 +0100 libpappsomspp (0.2.38-1) stretch; urgency=medium * centos7 compilation * fixed spectrum unique * better grouping performance -- Olivier Langella Sat, 21 Oct 2017 10:44:30 +0200 libpappsomspp (0.2.37-1) stretch; urgency=medium * new API for amino acid widlcards, new spectrum functions -- Olivier Langella Mon, 18 Sep 2017 10:29:48 +0200 libpappsomspp (0.2.36-1) stretch; urgency=medium * new peptide functions -- Olivier Langella Tue, 20 Jun 2017 21:53:35 +0200 libpappsomspp (0.2.35-1~stretch) stretch; urgency=medium * stretch pakage -- Olivier Langella Thu, 11 May 2017 15:02:25 +0200 libpappsomspp (0.2.35-1) jessie; urgency=medium * new grouping API -- Olivier Langella Wed, 26 Apr 2017 21:17:09 +0200 libpappsomspp (0.2.34-1) jessie; urgency=medium * new peptides API to handle modification removal -- Olivier Langella Mon, 24 Apr 2017 09:03:01 +0200 libpappsomspp (0.2.33-1~stretch) stretch; urgency=medium * stretch package -- Olivier Langella Tue, 18 Apr 2017 19:13:29 +0200 libpappsomspp (0.2.33-1) jessie; urgency=medium * better grouping, contaminant handler modified -- Olivier Langella Tue, 18 Apr 2017 11:17:20 +0200 libpappsomspp (0.2.32-3~stretch) stretch; urgency=medium * stretch package -- Olivier Langella Sat, 18 Mar 2017 13:50:48 +0100 libpappsomspp (0.2.32-3) jessie; urgency=medium * better intensity ratio isotope determination -- Olivier Langella Sat, 21 Jan 2017 12:13:24 +0100 libpappsomspp (0.2.32-2) stretch; urgency=medium * stretch package -- Olivier Langella Wed, 21 Dec 2016 21:43:27 +0100 libpappsomspp (0.2.32-1) jessie; urgency=medium * better spectrum API -- Olivier Langella Tue, 20 Dec 2016 17:01:04 +0100 libpappsomspp (0.2.31-2) stretch; urgency=medium * stretch package -- Olivier Langella Mon, 19 Dec 2016 18:45:14 +0100 libpappsomspp (0.2.31-1) jessie; urgency=medium * new modification replacer in digestion API -- Olivier Langella Wed, 07 Dec 2016 13:43:48 +0100 libpappsomspp (0.2.30-2) jessie; urgency=medium * digestion bug fixed -- Olivier Langella Mon, 14 Nov 2016 21:52:40 +0100 libpappsomspp (0.2.30-1) jessie; urgency=medium * new digestion API -- Olivier Langella Wed, 19 Oct 2016 21:50:47 +0200 libpappsomspp (0.2.29-1) jessie; urgency=medium * new peptide digestion pipeline -- Olivier Langella Tue, 13 Sep 2016 13:55:11 +0200 libpappsomspp (0.2.28-1) jessie; urgency=medium * don't handle xic sink pointer lifetime -- Olivier Langella Tue, 30 Aug 2016 17:12:30 +0200 libpappsomspp (0.2.27-1) jessie; urgency=medium * new ion types -- Olivier Langella Thu, 25 Aug 2016 07:48:16 +0200 libpappsomspp (0.2.26-1) jessie; urgency=medium * new features in xtandem hyperscore computations -- Olivier Langella Tue, 23 Aug 2016 10:06:12 +0200 libpappsomspp (0.2.25-1) jessie; urgency=medium * improving spectrum process for tandem hyperscore computation -- Olivier Langella Fri, 19 Aug 2016 10:54:19 +0200 libpappsomspp (0.2.24-1) jessie; urgency=medium * new API to digest protein, new documentation -- Olivier Langella Fri, 15 Jul 2016 16:01:40 +0200 libpappsomspp (0.2.23-1) jessie; urgency=medium * formula one -- Olivier Langella Sun, 03 Jul 2016 23:20:42 +0200 libpappsomspp (0.2.22-1) jessie; urgency=medium * XML id added in msrun -- Olivier Langella Sat, 25 Jun 2016 17:34:19 +0200 libpappsomspp (0.2.21-1) jessie; urgency=medium * computing PSI OBO modification masses using the diff formula -- Olivier Langella Fri, 24 Jun 2016 21:53:34 +0200 libpappsomspp (0.2.20-1) jessie; urgency=medium * compute amino acid mass using the chemical formula -- Olivier Langella Wed, 22 Jun 2016 21:47:53 +0200 libpappsomspp (0.2.19-1) jessie; urgency=medium * proton vs protium bug fixed -- Olivier Langella Wed, 22 Jun 2016 16:25:05 +0200 libpappsomspp (0.2.18-1) jessie; urgency=medium * disctinction between proton and protium mass -- Olivier Langella Wed, 22 Jun 2016 15:34:14 +0200 libpappsomspp (0.2.17-1) jessie; urgency=medium * amino acid precision goes now to 4 digits instead of previous 3 digits -- Olivier Langella Wed, 22 Jun 2016 13:48:34 +0200 libpappsomspp (0.2.16-1) jessie; urgency=medium * new syntax to limit modifications per site -- Olivier Langella Sun, 12 Jun 2016 08:12:44 +0200 libpappsomspp (0.2.15-1) jessie; urgency=medium * new API to build peptide modification pipeline from strings -- Olivier Langella Sat, 11 Jun 2016 22:15:09 +0200 libpappsomspp (0.2.14-1) jessie; urgency=medium * final fix into massrange -- Olivier Langella Fri, 20 May 2016 22:31:50 +0200 libpappsomspp (0.2.13-1) jessie; urgency=medium * bug fix on PAPPSO mass range build with upper and lower precision -- Olivier Langella Wed, 18 May 2016 15:25:20 +0200 libpappsomspp (0.2.12-1) jessie; urgency=medium * construct MassRange with upper and lower precisions -- Olivier Langella Mon, 02 May 2016 16:40:31 +0200 libpappsomspp (0.2.11-1) jessie; urgency=medium * get highest and lowest mass of MassRange -- Olivier Langella Thu, 28 Apr 2016 15:14:20 +0200 libpappsomspp (0.2.10-1) jessie; urgency=medium * peptide modification API modified, new Xic MS point distance function added -- Olivier Langella Sat, 09 Apr 2016 22:52:33 +0200 libpappsomspp (0.2.9-1) jessie; urgency=medium * copy constructor bug fixed in Xic isotope -- Olivier Langella Thu, 17 Mar 2016 08:46:10 +0100 libpappsomspp (0.2.8-2) jessie; urgency=medium * copy constructor added -- Olivier Langella Mon, 14 Mar 2016 21:18:37 +0100 libpappsomspp (0.2.8-1) jessie; urgency=medium * Precision pointers, xic detection methods -- Olivier Langella Thu, 10 Mar 2016 12:13:15 +0100 libpappsomspp (0.2.7-1) jessie; urgency=medium * combinations cached * parsing PSI MOD istope labels * semi tryptic digestion -- Olivier Langella Mon, 08 Feb 2016 09:06:57 +0100 libpappsomspp (0.2.6-2) jessie; urgency=medium * unneeded move constructor removed -- Olivier Langella Mon, 14 Dec 2015 22:26:54 +0100 libpappsomspp (0.2.6-1) jessie; urgency=medium * get ion list -- Olivier Langella Sat, 28 Nov 2015 23:05:36 +0100 libpappsomspp (0.2.5-2) jessie; urgency=medium * make shared pointer on ion fragment list -- Olivier Langella Sat, 28 Nov 2015 08:41:47 +0100 libpappsomspp (0.2.5-1) jessie; urgency=medium * new peptide functions -- Olivier Langella Sat, 21 Nov 2015 15:08:43 +0100 libpappsomspp (0.2.4-2) jessie; urgency=medium * symbols update -- Olivier Langella Sat, 07 Nov 2015 21:15:46 +0100 libpappsomspp (0.2.4-1) jessie; urgency=medium * better protein API -- Olivier Langella Sat, 07 Nov 2015 15:29:19 +0100 libpappsomspp (0.2.3-1) jessie; urgency=medium * avoid resource name conflicts -- Olivier Langella Fri, 23 Oct 2015 15:37:53 +0200 libpappsomspp (0.2.2-2) jessie; urgency=medium * U amino acid taken into account -- Olivier Langella Fri, 23 Oct 2015 13:08:17 +0200 libpappsomspp (0.2.2-1) jessie; urgency=medium * XIC detection API -- Olivier Langella Fri, 16 Oct 2015 14:12:09 +0200 libpappsomspp (0.2.0-2) jessie; urgency=medium * new peptide and spectrum API -- Olivier Langella Sat, 03 Oct 2015 23:17:10 +0200 libpappsomspp (0.2.0-1) jessie; urgency=medium * new API to digest and modify peptides -- Olivier Langella Wed, 30 Sep 2015 10:03:45 +0200 libpappsomspp (0.1.0-2) jessie; urgency=medium * better API to handle phospho loss -- Olivier Langella Mon, 14 Sep 2015 19:34:50 +0200 libpappsomspp (0.1.0-1) jessie; urgency=medium * better MS fragment ion support -- Olivier Langella Thu, 10 Sep 2015 22:32:02 +0200 libpappsomspp (0.0.4-3) jessie; urgency=medium * get PSI MOD name -- Olivier Langella Fri, 04 Sep 2015 17:09:35 +0200 libpappsomspp (0.0.4-2) jessie; urgency=medium * new getter to access obo term list -- Olivier Langella Fri, 04 Sep 2015 16:26:52 +0200 libpappsomspp (0.0.4-1) jessie; urgency=medium * new peptide parser using aa modifications -- Olivier Langella Thu, 03 Sep 2015 14:29:53 +0200 libpappsomspp (0.0.3-3) jessie; urgency=medium * library informations added in debian package (symbols, shlibs) -- Olivier Langella Wed, 19 Aug 2015 22:56:54 +0200 libpappsomspp (0.0.3-2) jessie; urgency=medium * little fix -- Olivier Langella Wed, 19 Aug 2015 16:38:26 +0200 libpappsomspp (0.0.3-1) jessie; urgency=medium * grouping functions OK -- Olivier Langella Tue, 18 Aug 2015 10:53:35 +0200 libpappsomspp (0.0.2-1) jessie; urgency=medium * first good package... I hope -- Olivier Langella Fri, 12 Jun 2015 08:58:19 +0200 libpappsomspp (0.0.1-5) jessie; urgency=medium * fix package concurency problem -- Olivier Langella Thu, 11 Jun 2015 15:26:37 +0200 libpappsomspp (0.0.1-4) jessie; urgency=medium * double Debian package for Qt4 and Qt5 -- Olivier Langella Thu, 11 Jun 2015 15:18:33 +0200 libpappsomspp (0.0.1-3) jessie; urgency=medium * cmake module added to dev package -- Olivier Langella Fri, 29 May 2015 16:08:52 +0200 libpappsomspp (0.0.1-2) jessie; urgency=medium * first Debian Jessie package -- Olivier Langella Fri, 29 May 2015 15:09:46 +0200 libpappsomspp (0.0.1-1) wheezy; urgency=low * first debian package -- Olivier Langella Mon, 16 Mar 2015 14:06:18 +0100