primer3 (2.4.0-2) unstable; urgency=medium
[ Liubov Chuprikova ]
* Team upload.
* Skip tests that fail on big endian
Closes: #890993
* Added d/README.source with explanation why some tests are skipped
* debian/patches/p3test_fix_exit_status.patch: Fix test to show correct exit
status
[ Andreas Tille ]
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
-- Liubov Chuprikova <chuprikovalv@gmail.com> Mon, 28 May 2018 13:44:30 +0000
primer3 (2.4.0-1) unstable; urgency=medium
* New upstream version
* Secure URI in watch file
* Standards-Version: 4.1.3
* debhelper 11
-- Andreas Tille <tille@debian.org> Wed, 21 Feb 2018 09:21:42 +0100
primer3 (2.3.7-5) unstable; urgency=medium
* d/upstream/metadata:
- Added references to registries
- yamllint cleanliness
-- Steffen Moeller <moeller@debian.org> Thu, 14 Sep 2017 15:05:29 +0200
primer3 (2.3.7-4) unstable; urgency=medium
* Fix build with gcc-7
Closes: #853621
* Standards-Version: 4.1.0 (no changes needed)
* d/rules: use DEB_SOURCE
* hardening=+all
-- Andreas Tille <tille@debian.org> Sat, 26 Aug 2017 06:55:03 +0200
primer3 (2.3.7-3) unstable; urgency=medium
[ Andreas Tille ]
* debhelper 10
* d/watch: version=4
[ Helmut Grohne ]
* Fix FTCBFS: Pass CXX as CPP (Closes: #851230)
-- Andreas Tille <tille@debian.org> Fri, 13 Jan 2017 08:32:57 +0100
primer3 (2.3.7-2) unstable; urgency=medium
* Team Upload
[ Andreas Tille ]
* Moved packaging from SVN to Git
* cme fix dpkg-control
* better hardening
* split example data for test into separate arch all package
* add lintian override for empty directories
[ Canberk Koç ]
* Autopkgtest added
* debian/rules:
- added dh_clean to override_dh_auto_test section
- sed perl interpreter path
-- Canberk Koç <canberkkoc@gmail.com> Mon, 27 Jun 2016 04:28:31 +0300
primer3 (2.3.7-1) unstable; urgency=medium
* New upstream version
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
-- Andreas Tille <tille@debian.org> Thu, 10 Mar 2016 18:56:25 +0100
primer3 (2.3.6-1) unstable; urgency=low
[ Charles Plessy ]
* New upstream release.
* Install configuration files in /etc (first step to fix bug 702693).
* Normalised debian/control with config-model-edit.
* Use canonical VCS URLs.
[ Andreas Tille ]
* Fix watch file
* replace cdbs by dh
* debian/patches/hardening.patch: Propagate hardening options
* Standards-Version: 3.9.5 (no changes needed)
* debian/patches/primer_thermodynamic_parameters_path_2_etc.patch:
Make sure config files will be searched for in /etc/primer3_config/
instead of /opt/primer3_config/
Closes: #702693
* Verified that new upstream
Closes: #716151, #716213
* New executable: ntthal (including manpage)
* Removed *.xml variants of manpages to reduce redundancy
-- Andreas Tille <tille@debian.org> Thu, 19 Dec 2013 09:58:19 +0100
primer3 (2.3.5-1) unstable; urgency=low
New upstream release.
[ Andreas Tille ]
* debian/upstream:
- Remove duplicated entry for PMID
- Added Volume, fixed Number
- Added URL+eprint
* debian/control:
- Removed DM-Upload-Allowed
- Standards-Version: 3.9.4 (no changes needed)
* debhelper 9 (control+compat)
* debian/copyright: PD License should be avoided - bumped packaging
to same license as program itself
-- Andreas Tille <tille@debian.org> Tue, 05 Feb 2013 10:11:37 +0100
primer3 (2.3.2-1) unstable; urgency=low
* New upstream release changing some default values.
* Refreshed debian/copyright to machine-readable format version 1.0.
Note that the license of Primer3 version 2.x changed to the GPLv2 or higher.
* Spellchecked manual pages (Closes: #650477, thanks to A. Costa).
* Using Debhelper 8 (debian/control, debian/compat).
* Renamed debian/README.Debian debian/README.test as it is all about tests.
* Conforms to Policy 3.9.3 (debian/control, no other changes needed).
-- Charles Plessy <plessy@debian.org> Thu, 22 Mar 2012 13:35:35 +0900
primer3 (2.2.3-1) unstable; urgency=low
* New upstream version
* debian/primer3.docs: s/README.txt/primer3_manual.htm/
* debian/compat: 7
* debian/control:
- Build-Depends: debhelper (>= 7)
- Standards-Version: 3.9.1 (no changes needed
* debian/source/format: 3.0 (quilt)
* debian/README.source
* debian/primer3.doc-base
-- Andreas Tille <tille@debian.org> Wed, 17 Nov 2010 14:01:59 +0100
primer3 (1.1.4-2) UNRELEASED; urgency=low
[ David Paleino ]
* Removed myself from Uploaders
[ Charles Plessy ]
* Documented informations in ‘debian/upstream-metadata.yaml’.
* Removed mention of the bibliographic reference and the webservice in
‘debian/control’.
-- David Paleino <d.paleino@gmail.com> Sat, 23 May 2009 14:47:37 +0200
primer3 (1.1.4-1) unstable; urgency=low
* New upstream release (No changes on Linux systems).
* Updated my email address (debian/control, debian/copyright, manpages).
* Updated the manpages:
- using DocBook 4.5
- incremented Primer3 version to 1.1.4
-- Charles Plessy <plessy@debian.org> Fri, 09 May 2008 12:54:28 +0900
primer3 (1.1.3-1) unstable; urgency=low
[ Charles Plessy ]
* New upstream version:
- 1.1.3: Corrected static buffer overflow errors in
boulder_print_pairs() and boulder_print_oligos() in primer3_main.c.
- 1.1.2: Updates to dpal.c so that no error forces an exit.
Adpatation in primer3_main.c and ntdpal_main.c to
updated error handling in dpal().
Arranged for primer3_main.c align() to check for
and circumvent local alignments to "targets" < 3 nucleotides
long, and added tests for this condition.
Comment and code readability updates in dpal.h and dpal.c
* Moved the Homepage: field out from the package's description.
* debian/control: updated Steffen's email address.
* debian/*.1.xml: corrected the headers of the sources of manpages.
* debian/rules: converted to CDBS.
[ David Paleino ]
* debian/ntdpal.1, debian/primer3_core.1 and debian/oligotm.1
added - manpages are statically built now
* debian/control:
- B-D updated
- added myself to Uploaders
* Updated to Standards-Version 3.7.3 (no changes needed)
-- Charles Plessy <charles-debian-nospam@plessy.org> Mon, 25 Feb 2008 16:31:58 +0900
primer3 (1.1.1-1) unstable; urgency=low
* New upstream release.
* Enhances: emboss because EMBOSS has a wrapper for primer3_core.
* Add Subversion repository URL to debian/control.
* Updated the manpages
-- Charles Plessy <charles-debian-nospam@plessy.org> Sun, 3 Jun 2007 16:16:19 +0900
primer3 (1.1.0~beta-1) experimental; urgency=low
* New upstream release.
- Some part of primer3 is now licenced under the GNU GPL.
- The oligtotm() function is now provided as a library, liboligotm.
- The oligotm executable now takes additional arguments.
- Non-backward compatible change: removed support of flag -2x_compat.
* Added a watch file now that the sources are hosted on SourceForge.net.
* Updated manpages.
-- Charles Plessy <charles-debian-nospam@plessy.org> Sun, 18 Feb 2007 09:04:16 +0900
primer3 (1.0b-1) unstable; urgency=low
* Initial release. (Closes: #241235)
* New upstream version released under a revised BSD licence.
* Swiching to collaborative maintainance: Maintainer is a mailing-list,
Uploaders are real people.
* Using debhelper v5 and conforming to policy 3.7.2.
* Relicencing the manpage of Primer3 (thanks to Steffen Moeller), adding one
for ntdpal and oligotm.
* Extensive tests during bulding, except on slow architectures.
-- Charles Plessy <charles-debian-nospam@plessy.org> Thu, 28 Sep 2006 20:18:54 +0900
primer3 (0.9-0.2) unstable; urgency=low
* Contacted upstream author, change of section to non-free/optional.
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Wed, 1 Apr 2004 15:07:10 +0200
primer3 (0.9-0.1) unstable; urgency=low
* Pre-Release.
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Wed, 31 Mar 2004 15:07:10 +0200