python-pybedtools (0.10.0-2) unstable; urgency=medium * Team upload. * d/patches/416.patch: Apply patch from upstream to fix Python3.13 issues in build (Closes: #1081673). -- Emmanuel Arias Thu, 14 Nov 2024 22:58:17 -0300 python-pybedtools (0.10.0-1) unstable; urgency=medium * New upstream version. Closes: #1068960 * Refreshed patches. -- Michael R. Crusoe Fri, 03 May 2024 17:43:13 +0200 python-pybedtools (0.9.1-1) unstable; urgency=medium [ Lance Lin ] * Team upload. * New upstream version * d/control: Replace autopkgtest-pkg-python with autopkgtest-pkg-pybuild * d/rules: - Enable build tests - Deselect test_chromsizes test, needs internet - Build docs with sphinx-build for Sphinx 7.1 (Closes: #1042651) - Remove autogenerated files from build * d/python-pybedtools-doc.docs: Change sphinx docs location * d/source/options: Ignore modified source files (Closes: #1048006) * d/patches/yaml_safe_load.patch: Modify safe_load for full_load where needed [ Andreas Tille ] * Remove unknown files in python module directory * Testsuite: autopkgtest-pkg-python (routine-update) * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) * Remove field Testsuite on binary package python-pybedtools-doc that duplicates source. -- Lance Lin Fri, 27 Oct 2023 19:35:26 +0700 python-pybedtools (0.9.0-4) unstable; urgency=medium * Team upload. * d/control: restore python3 all versions support now that pysam supports python3.11. Thanks to Andreas Beckmann for the reminder. (Closes: #1025116) * d/copyright: update copyright year. * d/control: declare compliance to standards version 4.6.2. -- Étienne Mollier Mon, 02 Jan 2023 21:49:24 +0100 python-pybedtools (0.9.0-3) unstable; urgency=medium * Team Upload. * d/watch: repair watch file from github changes. * d/control: stick to python3.10. (Closes: #1025116) -- Étienne Mollier Fri, 02 Dec 2022 12:19:36 +0100 python-pybedtools (0.9.0-2) unstable; urgency=medium * Team Upload. * Add patch to replace yaml.load calls with yaml.safe_load (Closes: #1022076) * Change B-D from python3-nose to python3-pytest (Closes: #1018560) * Bump Standards-Version to 4.6.1 (no changes needed) -- Nilesh Patra Sun, 23 Oct 2022 16:24:34 +0530 python-pybedtools (0.9.0-1) unstable; urgency=medium * Team upload. * Enable uscan downloading sensible file name -- Andreas Tille Thu, 17 Feb 2022 15:21:29 +0100 python-pybedtools (0.8.2-1) unstable; urgency=medium * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * watch file standard 4 (routine-update) * Fix installation of examples * No need to fix permissions any more -- Andreas Tille Mon, 18 Oct 2021 14:08:37 +0200 python-pybedtools (0.8.0-6) UNRELEASED; urgency=medium * Team upload. * Fix watchfile to detect new versions on github -- Andreas Tille Mon, 18 Oct 2021 13:33:21 +0200 python-pybedtools (0.8.0-5) unstable; urgency=medium * Fix binary-all build Closes: #960746 -- Andreas Tille Sun, 17 May 2020 07:51:43 +0200 python-pybedtools (0.8.0-4) unstable; urgency=medium * Team upload. * Rebuild against available architectures Closes: #960411 * Standards-Version: 4.5.0 (routine-update) * Remove trailing whitespace in debian/rules (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Add missing shebang lines in scripts * Move example script to examples * Fix permission of script -- Andreas Tille Wed, 13 May 2020 09:14:53 +0200 python-pybedtools (0.8.0-3) unstable; urgency=medium * Mark the -doc package Multi-Arch: foreign * debhelper-compat 12 * Testsuite: autopkgtest-pkg-python * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * Remove trailing whitespace in debian/control * Set upstream metadata fields: Repository. * Remove obsolete fields Name from debian/upstream/metadata. * -doc: add ${sphinxdoc:Built-Using} -- Michael R. Crusoe Thu, 14 Nov 2019 13:16:33 +0100 python-pybedtools (0.8.0-2) unstable; urgency=medium * Improved parsing of version of bedtool binary * Standards-Version: 4.3.0 -- Steffen Moeller Fri, 02 Aug 2019 16:15:52 +0200 python-pybedtools (0.8.0-1) unstable; urgency=medium * New upstream version. * d/control: - Standards-Version: 4.3.0 - No Python2 packages - Vcs links adapted for new home on salsa.d.o * d/copyright - adjusted paths for LGPL 2.1 files - added notion of GPL-2 (not later) files, credits for spotting those go to Thorsten Alteholz Created issue https://github.com/daler/pybedtools/issues/271 proposing to homogenize that licensing. -- Steffen Moeller Sat, 19 Jan 2019 15:41:02 +0100 python-pybedtools (0.7.10-2.1) REMOVED; urgency=medium * Removed from unstable and testing, see https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=894299 -- Steffen Moeller Wed, 13 Jun 2018 22:40:23 +0200 python-pybedtools (0.7.10-2) unstable; urgency=medium * Team upload * Add back test_issue_178 after upstream provided a patch -- Andreas Tille Thu, 09 Nov 2017 12:01:51 +0100 python-pybedtools (0.7.10-1) unstable; urgency=medium * Team upload. * New upstream version * Build-Depends: python3-all-dev (Thanks for the hint to Adrian Bunk ) Closes: #868927 * Standards-Version: 4.1.1 (no changes needed) * do not uselessly parse d/changelog * hardening * Exclude test test_issue_178 since it fails for strange reasons (to be clarified with upstream) -- Andreas Tille Wed, 08 Nov 2017 09:00:50 +0100 python-pybedtools (0.7.8-1) unstable; urgency=medium * Initial release. (Closes: #851358) -- Michael R. Crusoe Sat, 14 Jan 2017 01:51:01 -0800