sambamba (1.0.1+dfsg-2) unstable; urgency=medium
* Build-Depends: architecture-is-64-bit, architecture-is-little-endian
Closes: #1067959
* Drop unneeded copyright paragraph
* Drop unused patches
* Standards-Version: 4.7.0 (routine-update)
* Set upstream metadata fields: Repository.
* Build-Depends: s/pkg-config/pkgconf/
-- Andreas Tille <tille@debian.org> Tue, 16 Apr 2024 20:18:00 +0200
sambamba (1.0.1+dfsg-1) unstable; urgency=medium
* New upstream version
-- Andreas Tille <tille@debian.org> Mon, 21 Aug 2023 15:21:43 +0200
sambamba (1.0+dfsg-1) unstable; urgency=medium
* Fix watch file
* New upstream version
* Standards-Version: 4.6.2 (routine-update)
* Set field Upstream-Name in debian/copyright.
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.
-- Andreas Tille <tille@debian.org> Thu, 19 Jan 2023 12:18:33 +0100
sambamba (0.8.2+dfsg-2) unstable; urgency=medium
* Team upload.
* Build specifically needs ldc2 (from ldc package), thus adding ldc as
explicit build dependency.
-- Andrius Merkys <merkys@debian.org> Sat, 19 Feb 2022 02:36:22 -0500
sambamba (0.8.2+dfsg-1) unstable; urgency=medium
* Drop debian/gbp.conf
* d/rules: Do not link against libbiod
* New upstream version
* Add missing build dependency on dh addon.
* Remove unused override
-- Andreas Tille <tille@debian.org> Mon, 17 Jan 2022 16:15:11 +0100
sambamba (0.8.1+dfsg-2) unstable; urgency=medium
* Does not Build-Depend libbiod-dev any more
* Fix watchfile to detect new versions on github
-- Andreas Tille <tille@debian.org> Thu, 09 Dec 2021 08:18:47 +0100
sambamba (0.8.1+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.6.0 (routine-update)
* Refresh Patches
+ Replace DEB_TARGET_GNU_TYPE with DEB_HOST_MULTIARCH to find library
+ Fix fuzz in other patches
-- Nilesh Patra <nilesh@debian.org> Wed, 25 Aug 2021 20:10:28 +0530
sambamba (0.8.0+dfsg-1) unstable; urgency=medium
* Team Upload.
[ Steffen Möller ]
* Update metadata - added ref to guix, fixed indent
[ Nilesh Patra ]
* Add autopkgtests
* d/watch: Fix watch regex
* Repack to remove embedded shunit2
* d/lintian-overrides: Fix override
* Add d/gbp.conf
* d/salsa-ci.yml: Do not run build on i386, disable reprotest
* d/copyright: Fix all copyrights (Closes: #991371)
-- Nilesh Patra <nilesh@debian.org> Tue, 17 Aug 2021 21:11:39 +0530
sambamba (0.8.0-1) unstable; urgency=medium
* New upstream version
* Standards-Version: 4.5.1 (routine-update)
-- Andreas Tille <tille@debian.org> Fri, 04 Dec 2020 21:21:52 +0100
sambamba (0.7.1-5) unstable; urgency=medium
* Team upload.
[ Andreas Tille ]
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine-
update)
* Remove trailing whitespace in debian/changelog (routine-update)
* Add salsa-ci file (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit.
* DEP3
* Lintian-override for static linking
[ Étienne Mollier ]
* Define zlib dependency in meson.build. (Closes: #966914)
* Default to libcurl4-gnutls-dev as libcurl-dev dependency. (Fixes
lintian virtual-package-depends-without-real-package-depends)
-- Étienne Mollier <etienne.mollier@mailoo.org> Wed, 11 Nov 2020 09:27:56 +0100
sambamba (0.7.1-4) unstable; urgency=medium
* d/control:
- versioned dependency on htslib-dev to request non-stripped libhts.a
- Standards-Version: 4.5.0
- debhelper-compat 13
- Rules-Requires-Root: no
- Completed dependencies for cowbuilder
* d/rules: better clean
-- Steffen Moeller <moeller@debian.org> Sun, 05 Jul 2020 01:53:01 +0200
sambamba (0.7.1-3) unstable; urgency=medium
* Fixed build failure (Closes: # 948919)
with
- dependency on newer htslib package that is not stripped
- and exports the cram_to_bam function
- avoided use of inline htslib function by sambamba
Upstream informed on https://github.com/samtools/htslib/issues/1098
-- Steffen Moeller <moeller@debian.org> Sat, 04 Jul 2020 19:18:06 +0200
sambamba (0.7.1-2) UNRELEASED; urgency=medium
* Use 2to3 to port from Python2 to Python3
Closes: #938431
* Set upstream metadata fields: Repository, Repository-Browse.
-- Andreas Tille <tille@debian.org> Tue, 17 Dec 2019 21:03:13 +0100
sambamba (0.7.1-1) unstable; urgency=medium
[ Andreas Tille ]
* New upstream release
Closes: #907489
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Add build time test
* Allow pre-releases in watch file
* Versioned Build-Depends: libbiod (>= 0.2.1)
[ Steffen Möller ]
* Update metadata with ref to conda
[ Matthias Klumpp ]
* New upstream version: 0.7.1
* Run tests and build with strong optimizations
* add-meson-build.patch: Update Meson build definition
- Closes: #907489
- We link against BioD stantically now
- Tests are integrated into Meson
- Allow switching on stronger optimizations used by the
upstream Makefile
* Depend on latest libbiod (>= 0.2.3)
* Don't depend on libundead
* Bump dh compat level to 12
* Bump standards version (No changes needed)
* Remove test artifacts in clean target
-- Matthias Klumpp <mak@debian.org> Sun, 15 Dec 2019 12:52:42 +0100
sambamba (0.6.7-2) unstable; urgency=medium
* Team upload.
* Disable assert on i386, this is a new assert, but the current
package is already broken on i386.
Upstream is working on a proper fix, in the meantime we can let
the package migrate without removing i386 or making things worse
for this architecture. Closes: #893664
See: https://github.com/biod/sambamba/issues/344 (and issue 300)
[ Steffen Möller ]
* Update upstream metadata file
[ Matthias Klumpp ]
* Fail on missing files
* Do not force disable of neon on armhf in rules file, already
handled by dh-dlang
[ Andreas Tille ]
* Fix typo in metadata file
-- Gianfranco Costamagna <locutusofborg@debian.org> Wed, 18 Apr 2018 12:10:12 +0200
sambamba (0.6.7-1) unstable; urgency=medium
[ Steffen Moeller ]
* debian/upstream/metadata:
- yamllint cleanliness
- added references to registries
[ Andreas Tille ]
* New upstream version
* Use dh-dlang
* Standards-Version: 4.1.3
* debhelper 11
* enable hardening options
* move bash_completion scripts to new location
-- Andreas Tille <tille@debian.org> Tue, 20 Mar 2018 10:53:49 +0100
sambamba (0.6.6-1) unstable; urgency=medium
* Initial release (Closes: #871497)
-- Andreas Tille <tille@debian.org> Tue, 08 Aug 2017 17:20:06 +0200