seqan (1.4.2+dfsg-3) unstable; urgency=medium
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
-- Andreas Tille <tille@debian.org> Mon, 16 Jul 2018 12:21:54 +0200
seqan (1.4.2+dfsg-2) unstable; urgency=medium
* Team upload.
* Declare Conflicts: with libseqan2-dev (API incompatible)
See https://github.com/seqan/seqan/issues/1820 for upstream discussion.
Addresses #838340.
-- Sascha Steinbiss <satta@debian.org> Fri, 23 Sep 2016 14:20:09 +0000
seqan (1.4.2+dfsg-1) unstable; urgency=medium
[Andreas Tille]
* New upstream version
Closes: #766741
* Moved packaging to Git
* Adapt watch file to fetch only seqan 1.x series
* Update list of uploaders
* Add compression option to watch file
* Remove extras and core/apps from upstream source since these will be taken
from seqan2 series (when doing so remove other unneeded stuff and binary
files)
* Add README.source to explain removals
* Moved debian/upstream to debian/upstream/metadata
* Drop documentation since developers should rather use seqan2
Closes: #816988, #809058
* Install cmake files
Closes: #818088
[Gert Wollny]
* d/rules: Add -DNDEBUG to CXXFLAGS, Closes: #811841
* d/rules: enable parallel build
-- Andreas Tille <tille@debian.org> Tue, 02 Aug 2016 15:58:06 +0200
seqan (1.4.1+dfsg-2) unstable; urgency=medium
* Do proper manipulation of build options (thanks for the hint to
Etienne Millon <me@emillon.org>)
Closes: #759978, #752558
-- Andreas Tille <tille@debian.org> Mon, 01 Sep 2014 22:54:54 +0200
seqan (1.4.1+dfsg-1) unstable; urgency=medium
* Fix FTBFS on many buildds due to RAM exhaustion (thanks to
Dejan Latinovic <Dejan.Latinovic@imgtec.com> for the patch)
Closes: #741288
* debian/copyright (watch+rules): Remove compressed and unused
JS files from upstream source
-- Andreas Tille <tille@debian.org> Thu, 31 Jul 2014 21:18:43 +0200
seqan (1.4.1-3) unstable; urgency=medium
* debian/rules:
- Run test suite only on powerfull architectures (amd64)
at build time
* deacticate test for apps splazers which fails since some point
in time after uploading 1.4.1-2
Closes: #733250
-- Andreas Tille <tille@debian.org> Tue, 28 Jan 2014 09:09:09 +0100
seqan (1.4.1-2) unstable; urgency=low
* debian/seqan-apps.links: s/mason/seqan_mason
Closes: #730751
-- Andreas Tille <tille@debian.org> Fri, 29 Nov 2013 11:39:01 +0100
seqan (1.4.1-1) unstable; urgency=low
* New upstream version (patch became unneeded)
Closes: #720995
* debian/upstream:
- Moved DOI+PMID to References
- Added eprint
* debian/reference: Deleted in favour of data in debian/upstream
* debian/watch: adapted to changes at upstream
* debian/orig-tar.sh: Removed because the removed file is not part
of the source any more
* debian/control:
- debhelper 9
- remove cdbs from / add python to Build-Depends
- cme fix dpkg-control
- canonical Vcs URLs
* debian/copyright:
- DEP5
- Add Upstream-Contact according to latest discussion
- Update Source to actual download tarball
* debian/rules:
- cdbs -> dh
- Need to rename /usr/bin/join to /usr/bin/seqan-join to avoid
name clash with coreutils
* debian/generate_manpages: use help2man to autogenerate manpages
* debian/README.Debian: Describe what apps go to /usr/bin and why
* debian/seqan-apps.links: Update apps that should go to /usr/bin
according to mail from upstream
-- Andreas Tille <tille@debian.org> Wed, 27 Nov 2013 10:26:17 +0100
seqan (1.3.1-1) unstable; urgency=low
* New upstream version
* debian/watch: Adapt to new way to provide release archives
* debian/orig-tar.sh:
- Be less noisy
- Provide fallback target dir in case .svn/deb-layout doese not
exist - which is the case at least in my checkout
* debian/control:
- Standards-Version: 3.9.3 (no changes needed)
- distinct short descriptions
* debian/seqan-dev.doc-base: Provide doc-base control file
* debian/rules + several debhelper files:
Rely more on debhelper than manual moving around files to make
debian/rules better maintaineable
* debian/rules:
- Do not specify single target files but rather use find to
obtain files to move around
- Save a copy of those files which will be removed by upstream
clean target otherwise to enable building twice in a row
-- Andreas Tille <tille@debian.org> Mon, 23 Apr 2012 13:25:17 +0200
seqan (1.3-1) unstable; urgency=low
* Team upload.
* New upstream release (Closes: #640302).
[ Charles Plessy ]
* Collected various informations in ‘debian/upstream-metadata.yaml’.
* Compress the source and binary packages with xz
(debian/orig-tar.sh, debian/rules).
* Removed convenience code copy of samtools (debian/orig-tar.sh).
* Use Debhelper 8 (debian/compat, debian/control).
* Conforms to Policy 3.9.2 (debian/control, no other changes needed).
* Built using the cmake class of CDBS (debian/rules).
* debian/control:
- Corrected VCS URLs.
- Build-Depend on libboost-dev as Cmake was looking for it.
- Build-Depend on zlib1g-dev, as seqan needs to detect zlib to set
SEQAN_HAS_SAMTOOLS to 1.
- Changed Priority from extra to optional.
- Changed seqan-apps Section from libdevel to science.
* debian/patch/samtools.patch corrects path to SAMtools headers.
* Machine-readable debian/copyright.
[ Andreas Tille ]
* debian/control
- added myself to uploaders
- Standards-Version: 3.9.1 (no changes needed)
* debian/watch: Also catch RC candidates
* debian/source/format: 3.0 (quilt)
-- Charles Plessy <plessy@debian.org> Fri, 16 Sep 2011 12:51:39 +0900
seqan (1.2-1) unstable; urgency=low
* Initial Release (Closes: #487361)
-- Soeren Sonnenburg <sonne@debian.org> Wed, 30 Sep 2009 20:41:39 +0200