beast-mcmc (1.10.4+dfsg-5) unstable; urgency=medium
* Team upload.
* Refresh ignore_mac_install.patch.
* Adjust update-ejml.patch to build with libejml-java 0.41.
-- Andrius Merkys <merkys@debian.org> Thu, 24 Nov 2022 02:40:16 -0500
beast-mcmc (1.10.4+dfsg-4) unstable; urgency=medium
* Fix watch file
* Standards-Version: 4.6.1 (routine-update)
-- Andreas Tille <tille@debian.org> Tue, 01 Nov 2022 19:49:33 +0100
beast-mcmc (1.10.4+dfsg-3) unstable; urgency=medium
[ Debian Janitor ]
* Apply multi-arch hints.
+ beast-mcmc-examples: Add Multi-Arch: foreign.
[ Andreas Tille ]
* Fix watchfile to detect new versions on github
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
* watch file standard 4 (routine-update)
-- Andreas Tille <tille@debian.org> Fri, 01 Oct 2021 12:46:38 +0200
beast-mcmc (1.10.4+dfsg-2) unstable; urgency=medium
* Team upload.
* Migrating to libejml-java 0.38.
-- Andrius Merkys <merkys@debian.org> Wed, 13 Nov 2019 01:19:29 -0500
beast-mcmc (1.10.4+dfsg-1) unstable; urgency=medium
[ Andreas Tille ]
* New upstream version
* Exclude Latex doc creation
* New Build-Depends: libejml-java
* New versioned Build-Depends: libhmsbeagle-java (>= 3.0.2)
* Standards-Version: 4.2.1
* Do not try to install mac and windows build
[ Jelmer Vernooij ]
* Use secure copyright file specification URI.
* Trim trailing whitespace.
[ Andreas Tille ]
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
* Tracer is not build in separate build_tracer.xml any more
* Upstream does not ship PDF docs any more thus drop -doc package
* Versioned (Build-)Depends: libhmsbeagle-java (>= 3.1.2~)
-- Andreas Tille <tille@debian.org> Tue, 18 Dec 2018 15:52:51 +0100
beast-mcmc (1.8.4+dfsg.1-3) unstable; urgency=medium
[ Steffen Moeller ]
* d/control: Standards-Version: 4.1.3 (no changes needed)
* d/u/metadata:
- added RRIDs
- added \n to end of file
[ Andreas Tille ]
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* debhelper 11
* Build-Depends: texlive-fonts-recommended
[ Adrian Bunk ]
* Fix encoding issues that caused FTBFS with TeX Live 2018
Closes: #896483
-- Andreas Tille <tille@debian.org> Sat, 19 May 2018 08:28:51 +0200
beast-mcmc (1.8.4+dfsg.1-2) unstable; urgency=medium
* Architecture: any
Closes: #780428
* debhelper 10
* Standards-Version: 4.1.0 (no changes needed)
* hardening=+all
* d/rules: do not parse d/changelog
-- Andreas Tille <tille@debian.org> Mon, 04 Sep 2017 09:58:57 +0200
beast-mcmc (1.8.4+dfsg.1-1) unstable; urgency=medium
* Drop packaging tools from upstream source
* Add missing copyright
* Fix section for all binary packages
Closes: #829174
-- Andreas Tille <tille@debian.org> Fri, 01 Jul 2016 11:08:37 +0200
beast-mcmc (1.8.4+dfsg-1) unstable; urgency=medium
* New upstream version
* debian/rules: export LC_ALL=C.UTF-8 to cope with encoding issues
* Upload to unstable (main)
-- Andreas Tille <tille@debian.org> Tue, 28 Jun 2016 09:26:11 +0200
beast-mcmc (1.8.3+dfsg-1) experimental; urgency=medium
* New upstream version
* Upload to official Debian (experimental)
* cme fix dpkg-control
-- Andreas Tille <tille@debian.org> Thu, 02 Jun 2016 14:41:23 +0200
beast-mcmc (1.8.2-1) unstable; urgency=medium
* Adapt d/watch to changed release names
* Rename new binary tracer to beast-tracer
Closes: #813086
-- Andreas Tille <tille@debian.org> Fri, 29 Jan 2016 16:03:31 +0100
beast-mcmc (1.8.2~754b844-2) unstable; urgency=medium
* Depends: libnetlib-java
* Force exact version match with libnucleotidelikelihoodcore0
* Add mtj.jar explicitly to classpath in wrapper script
* Build tracer.jar as well
-- Andreas Tille <tille@debian.org> Thu, 28 Jan 2016 10:39:20 +0100
beast-mcmc (1.8.2~754b844-1) unstable; urgency=medium
* New upstream version
* d/watch: Point to Github (moved from Google Code)
* Build-Depends: libcolt-free-java (instead of libcolt-java which leaves
libmtj-java the last remaining dependency from contrib)
* drop debian/get-orig-source since uscan can deal with all issues
* d/copyright:
* Adapt source location
* More Files-Excluded
* Bumped version in versioned Build-Depends: libhmsbeagle-dev
(>= 2.1.2+20150609)
* Bumped version in versioned Build-Depends: libjam-dev
(>= 0.1.20140824)
* Moved from SVN to Git
-- Andreas Tille <tille@debian.org> Sun, 19 Jul 2015 20:15:51 +0200
beast-mcmc (1.8.0-1) unstable; urgency=medium
* New upstream version
* libnucleotidelikelihoodcore0: Architecture: amd64
* d/watch: Stick to 1.x series of beast-mcmc
* cme fix dpkg-control
* fix encoding issue
* Explicitly add multiarch library PATH to wrapper script to make sure
libhmsbeagle-jni will be found
* Add test but do not add autopkgtest control file for the moment
(since contrib is not tested anyway)
* Fix package description
Closes: #716790
-- Andreas Tille <tille@debian.org> Tue, 30 Sep 2014 18:15:36 +0200
beast-mcmc (1.7.5-1) unstable; urgency=low
* New upstream version
* Add debian/README.source explain why we stick to 1.7.x series for
the moment
-- Andreas Tille <tille@debian.org> Thu, 30 May 2013 15:04:56 +0200
beast-mcmc (1.7.4-2) experimental; urgency=low
* Add copyright license info for file (Closes: #698497).
- src/dr/math/matrixAlgebra/RobustSingularValueDecomposition.java
-- Olivier Sallou <osallou@debian.org> Sat, 23 Feb 2013 20:55:28 +0100
beast-mcmc (1.7.4-1) experimental; urgency=low
* New upstream version (adapted patches)
* debian/{control,rules}: use default java implementation
thanks for the patch to James Page <james.page@ubuntu.com>
Closes: #683509
* debian/control:
- rename beast-mcmc-lib to libnucleotidelikelihoodcore0
- Standards-Version: 3.9.4 (no changes needed)
- do not depend from xterm any more
- versioned (Build-)Depends from libhmsbeagle-java
* Remove now unneeded lintian overrides
* debian/patches/create_soname.patch: Create soname for library
* debian/rules: silence pdflatex for better readable build logs
-- Andreas Tille <tille@debian.org> Mon, 17 Dec 2012 16:43:17 +0100
beast-mcmc (1.6.2-3) unstable; urgency=low
* rename pixmap for menu to avoid name space conflict
Closes: #680483
-- Andreas Tille <tille@debian.org> Fri, 06 Jul 2012 11:30:19 +0200
beast-mcmc (1.6.2-2) unstable; urgency=low
* debian/control: rename beast-doc to beast-mcmc-doc
Closes: #679394
For consistency reasons also rename beast-examples to
beast-mcmc-examples
-- Andreas Tille <tille@debian.org> Fri, 29 Jun 2012 11:24:51 +0200
beast-mcmc (1.6.2-1) unstable; urgency=low
* Initial release. (Closes: #552101)
-- Andreas Tille <tille@debian.org> Tue, 05 Jun 2012 14:38:11 +0200