biosig (2.5.0-1) unstable; urgency=medium * Team upload. * New upstream version (all patches applied upstream) * Fix watch file * Standards-Version: 4.6.2 (routine-update) -- Andreas Tille Thu, 05 Jan 2023 08:15:48 +0100 biosig (2.4.0-2) unstable; urgency=medium * Team upload. * Add arch.patch: fix baseline violation and ftbfs. (Closes: #1012416) * Standards-Version: 4.6.1 (routine-update) -- Étienne Mollier Mon, 06 Jun 2022 22:21:51 +0200 biosig (2.4.0-1) unstable; urgency=medium * Team upload. * New upstream version * Make sure package builds with dcmtk 3.6.7 Closes: #1010545 -- Andreas Tille Thu, 12 May 2022 08:46:25 +0200 biosig (2.3.3-1) unstable; urgency=medium [ Alois Schlögl ] * libbiosig: - improved support for the following data formats: EDF+ : relax requirement that reserved field must start with "EDF+" ABF2 : check scaling - seems good ATF : support multi-channel traces, segments will be concatanated (and not considered different channels) AXG : extend support to some real-world data sets * biosig4matlab - add Machine-Learning-Optimal-Detection (MOD) method (Zhang et al. 2020,2021) including demo script - rotary-decoder added (used in Zhang et al. 2020) biosig4matlab/t250_ArtifactPreProcessingQualityControl/rotary_decoder.m - sopen (gdf): add support for timezone information - fix issue eeglab#93 (encoding of EDF+ annotations) [ Andreas Tille ] * Standards-Version: 4.6.0 (routine-update) -- Alois Schlögl Sat, 02 Oct 2021 15:32:14 +0200 biosig (2.1.2-4) unstable; urgency=medium * libbiosig: cherry pick some patches from upstream - fix EDF-to-GDF conversion for certain files - fix JSON export when SampleRate is undefined (e.g. Infinity) -- Alois Schlögl Thu, 15 Apr 2021 21:04:32 +0200 biosig (2.1.2-3) unstable; urgency=medium [ Alois Schlögl ] * octave-biosig: - bug fix: EDF+ event import (eeglab issue #93) - GDF files: support reading and writing of timezone information -- Alois Schlögl Tue, 26 Jan 2021 22:47:42 +0200 biosig (2.1.2-2) unstable; urgency=medium * Team upload. * debian/tests/control: - Rename command1 to octave-ext-prints-usage - Fix test failure with allow-stderr - Try to avoid octave's X11 warnings * Update merge request information in debian/patches * debian/watch: version=4 -- Juhani Numminen Sat, 16 Jan 2021 14:07:42 +0200 biosig (2.1.2-1) unstable; urgency=medium * Team upload. [ Alois Schlögl ] * update to upstream version 2.1.2 * build biosig4python for all supported python versions * add biosig2gdf (which is required and useful for loadgdf{py,r}) [ Juhani Numminen ] * debian/rules: - Replace explicit dh_numpy3 and dh_octave* by "dh --with" - Don't run the configure step twice and remove commented code - Build python packages by executing pybuild commands - Permissions fixing is now done by a patch * Create d/octave-biosig.install to replace installation code in d/rules * Create d/clean to replace cleaning code in d/rules * Document non-installed files in d/not-installed and let dh_missing fail if unknown files appear * New patches: - submake.patch: avoid "warning: jobserver unavailable" - cppflags_ldflags.patch: apply LDFLAGS and CPPFLAGS - delete_extra_dpkg_buildflags.patch: eliminate a potential source of packager confusion - disable_python_rule.patch: only use debian/rules to build python extension - clean_biosig2gdf.patch: add biosig2gdf executable to cleaned files - install_permissions.patch: give non-exec permissions to a *.pc file - install_strip.patch: do not strip debug symbols from the shared library * Use autopkgtest-pkg-python to check that the python module exists * Add superficial autopkgtest: octave --eval mexSLOAD * debian/control: - Add ${devlibs:Depends} to libbiosig-dev Depends - Fix typo in homepage - Standards-Version: 4.5.1 * Trim trailing whitespace in debian/changelog -- Juhani Numminen Thu, 14 Jan 2021 17:09:54 +0200 biosig (2.1.0-1) unstable; urgency=medium * Adapt Vcs fields on Salsa to new source package name * Build-Depends: python3-setuptools * Closes: #972684, #973435 * adapt config.status file -- Alois Schlögl Thu, 12 Nov 2020 23:17:41 +0200 biosig (2.0.6-1) unstable; urgency=medium [ Alois Schlögl ] * Fix Build-Depends * Fix Homepage * Fix watch file * add "Biosig for Octave and Matlab" and rename debian source package from "biosig4c++" to "biosig" * "Biosig for Octave and Matlab" is added to octave-biosig package * push SONAMEVERSION (provides libbiosig3 instead of libbiosig2) * fix configure for tinyxml * update to new upstream (v2.0.6, commit b605b38417630f4a5ee2fa7dcc886164041295da + some more changes) [ Andreas Tille ] * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Add Alois Schlögl to Uploaders * Fix installation of manpages * Reviewed debian/copyright -- Alois Schlögl Mon, 24 Aug 2020 01:07:41 +0200 biosig4c++ (1.9.5-2) UNRELEASED; urgency=medium * Build-Depends: python3-all-dev to cope with piuparts issue -- Andreas Tille Tue, 03 Mar 2020 09:07:32 +0100 biosig4c++ (1.9.5-1) unstable; urgency=medium [ Yaroslav Halchenko ] * Fresh upstream release * debian/patches - dropped patches/fix_soname.patch -- upstreamed * debian/control - added libtinyxml-dev to build-depends [ Andreas Tille ] * Take over package into Debian Med team maintenance * debian/gbp.conf: deleted since converted to default layout * Provide symbols file only for architectures where it can be used unchanged * Add Build-Depends: libdcmtk-dev, libxml2-dev, libb64-dev as upstream suggests * debhelper-compat 12 * Standards-Version: 4.5.0 * Secure URI in copyright format * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * Remove trailing whitespace in debian/changelog * Remove trailing whitespace in debian/rules * Use secure URI in debian/watch. * Remove empty debian/patches/series. * Set upstream metadata fields: Archive, Repository. * Drop Python2 support (some refinements for Python3 only Closes: #936207 * Refresh symbols file Closes: #925643 * Fix permissions * Drop unused lintian-overrides -- Andreas Tille Mon, 02 Mar 2020 08:32:47 +0100 biosig4c++ (1.9.3-1) unstable; urgency=medium * Team upload. [ Andreas Tille ] * New upstream version Closes: #860081 * debian/gbp.conf: - debian-branch is now debian - cleanup from old syntax specifying default settings * debhelper 9 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.3.0 * debian/blends: removed since redundant (debian/upstream/metadata) * Drop -dbg package in favour of autogenerated one * Add python3-biosig * Delete outdated README.Debian * Drop paragraph about source tarball generated from git from README.source * Adapt lintian-overrides * Use d-shlibs * Several symbols from version 1.3.6 are missing thus there is an ABI change and SOVERSION needs to be bumped --> set SOVERSION=2 * Re-activate and update symbols file [ Rafael Laboissiere ] * d/control: Build-depends on dh-octave * d/rules: Use dh_octave_substvar for determining octave:Depends Closes: #890060 * Use unversioned path for installing the *.mex files Closes: #734046 -- Andreas Tille Thu, 17 Jan 2019 14:44:34 +0100 biosig4c++ (1.4.1-1) experimental; urgency=low * Fresh upstream release: - adopted up_correct_biosig_LIBS_in_mex and up_no_need_for_-lidn patches - restored some API removed in 1.4.0 (one overload _Z8ReadByteIaEvRT_@Base was still removed, allowing to slip through) * debian/watch: adjusted according to Alois (upstream) recommendation * debian/control: - Removed libxml2 from Build-Depends (upstream's hint) -- Yaroslav Halchenko Thu, 25 Oct 2012 10:22:07 -0400 biosig4c++ (1.3.6-1) experimental; urgency=low * New upstream (primarily bugfix) release * debian/patches - deb_no_mex_copy_upstairs: adjusted to just override COPY in mex/Makefile - deb_no_locals: adopted upstream - others refreshed to reflect (partial) adoption upstream and changes - up_no_need_for_-lidn to remove obsolete -lidn -- Yaroslav Halchenko Fri, 07 Sep 2012 14:44:22 -0400 biosig4c++ (1.3.5-1) experimental; urgency=low * New upstream release (restores compatibility with API 1.3 broken in non-uploaded revisions) * debian/patches - 0001-Revert-do-not-install-dynamic-library-we-need-dynami.patch to install shared library - up_correct_biosig_LIBS_in_mex to provide correct args for mkoctfile while linking against dynamic library -- Yaroslav Halchenko Wed, 11 Jul 2012 09:40:16 -0400 biosig4c++ (1.3.0-2.1) unstable; urgency=medium * Non-maintainer upload. * Port from python-support to dh_python2. (Closes: #785953) -- Stefano Rivera Wed, 19 Aug 2015 20:32:12 +0200 biosig4c++ (1.3.0-2) unstable; urgency=low * Do not build biosig_{client,server} which are still experimental and actually were not shipped within any package anyway (as a side-effect Closes: #675582) -- Yaroslav Halchenko Sun, 03 Jun 2012 22:18:19 -0400 biosig4c++ (1.3.0-1) unstable; urgency=low * Fresh upstream release - libbiosig now SOVERSION 1, thus libbiosig1{,-dbg} to replace libbiosig0 * debian/copyright: updated for DEP5 * debian/patches: - added up_memcpy_str_cast (sent upstream) - removed up_for_loop_initial (upstreamed) - removed up_*oct* (no hardcoded octave version information in upstream Makefile any longer), deb_link_dynamically_python - removed deb_link_dynamically in favor of specifying LIBEXT=so to calls to make - removed deb_use_borrowed_eventcodes: now debian/upstream-extern provides needed extra external files (from biosig) and gets symlinked as extern at build time - refreshed deb_no_mex_copy_upstairs,deb_no_locals * upstream-files/eventcodes.txt -- refreshed from online * debian/control: - new build-depends: gawk, libxml2-dev - boosted policy to 3.9.3 -- no further changes -- Yaroslav Halchenko Thu, 24 May 2012 09:22:13 -0400 biosig4c++ (0.96.3+svn2677-4) UNRELEASED; urgency=low * debian/upstream: Authors need to be separated by ' and ' rather than by ',' -- Andreas Tille Wed, 09 May 2012 09:48:22 +0200 biosig4c++ (0.96.3+svn2677-3) unstable; urgency=low * ACK the .1 NMU (Thank you Miguel) - debian/rules: call dh_numpy only if available * Use unversioned mkoctfile (Closes: #665051). Thanks Lucas Nussbaum for the report and Nicolas Bourdaud for the patch. * debian/rules, debian/control - fixed typo in debian/control resulting in octave:Depends - adjusted conditional use of octave-depends across systems (should generate octave:Depends subst for recent systems lacking octave-depends) * debian/patches: refreshed -- Yaroslav Halchenko Wed, 11 Apr 2012 12:36:54 -0400 biosig4c++ (0.96.3+svn2677-2.1) unstable; urgency=low * Non-maintainer upload. * Fix "missing dependency on python-numpy" by adding dh_numpy under override_dh_auto_install (Closes: #641790) -- Miguel de Val Borro Fri, 02 Dec 2011 20:02:39 +0100 biosig4c++ (0.96.3+svn2677-2) unstable; urgency=low * up_for_loop_initial patch to prevent FTBFS. Thanks Aurelien Jarno for report and patch (Closes: #633346) -- Yaroslav Halchenko Sat, 09 Jul 2011 10:40:56 -0400 biosig4c++ (0.96.3+svn2677-1) unstable; urgency=low * Initial release (Closes: #585533) * Ship and use a copy of eventcodes.txt from biosig project * Patches added: - up_system_octave_version to build against default available version of octave - deb_no_mex_copy_upstairs to not try copy resultant .mex files outside of the tree - deb_link_dynamically* to assure dynamic linking against the library - deb_no_locals to avoid errorneous linking against /usr/local -- Yaroslav Halchenko Thu, 05 May 2011 12:28:27 -0400 biosig4c++ (0.94.2+svn2552-1~pre1) UNRELEASED; urgency=low * New upstream snapshot: some API extensions in the library interface * Assure linking of .so against used libraries * Symlinks for the missing manpages -- Yaroslav Halchenko Fri, 29 Oct 2010 00:58:54 -0400 biosig4c++ (0.94.1+svn2521-1~pre0) UNRELEASED; urgency=low * Initial Debian packaging. -- Yaroslav Halchenko Fri, 11 Jun 2010 01:19:48 -0400