cctbx (2024.10+ds2+~3.22.1+ds1-4) unstable; urgency=medium * Bug fix: "removal of Python standard libraries in Python 3.13", thanks to Louis-Philippe Véronneau (Closes: #1084540). -- Roland Mas Wed, 20 Nov 2024 15:50:35 +0100 cctbx (2024.10+ds2+~3.22.1+ds1-3) unstable; urgency=medium * refresh the annlib_adaptor so the test are now ok * d/t/control: no more flaky test -- Picca Frédéric-Emmanuel Wed, 20 Nov 2024 09:19:32 +0100 cctbx (2024.10+ds2+~3.22.1+ds1-2) unstable; urgency=medium * Mark part of the testsuite as flaky for now. -- Roland Mas Wed, 13 Nov 2024 14:55:22 +0100 cctbx (2024.10+ds2+~3.22.1+ds1-1) unstable; urgency=medium * New upstream release. -- Roland Mas Wed, 13 Nov 2024 12:16:10 +0100 cctbx (2024.8+ds2+~3.21.1+ds1-3) unstable; urgency=medium * Bug fix: "FTBFS deliberately on 32 bit archs", thanks to Bastian Germann (Closes: #1029789). * Add myself to Uploaders. -- Roland Mas Tue, 01 Oct 2024 20:12:32 +0200 cctbx (2024.8+ds2+~3.21.1+ds1-2) unstable; urgency=medium * Team upload. * Replace orderedset with ordered_set since the former seems no longer maintained. -- Roland Mas Fri, 27 Sep 2024 19:16:24 +0200 cctbx (2024.8+ds2+~3.21.1+ds1-1) unstable; urgency=medium * New upstream version 2024.8+ds2+~3.21.1+ds1 * Bug fix: "autopkgtest failure with Python 3.12 only", thanks to Graham Inggs (Closes: #1076084). * d/control: B-D added libboost-timer-dev, python3-hdf5plugin, python3-natsort * d/p/*: - Refreshed for the new version - Added 0026-remove-distutils-in-some-modules.patch * d/rules: remove workaround since upstream added missing __init__.py files -- Picca Frédéric-Emmanuel Wed, 25 Sep 2024 16:56:44 +0200 cctbx (2023.12+ds2+~3.17.0+ds1-4) unstable; urgency=medium * Bug fix: "autopkgtest regression", thanks to Graham Inggs (Closes: #1061604). - d/t/control: Added g++ in order to have a working c++ compiler for tests. -- Picca Frédéric-Emmanuel Wed, 28 Feb 2024 13:45:40 +0100 cctbx (2023.12+ds2+~3.17.0+ds1-3) unstable; urgency=medium * Team upload. [ Alexandre Detiste ] * python3-future is being removed from Debian (Closes: #1061405) -- Andrius Merkys Wed, 24 Jan 2024 02:13:56 -0500 cctbx (2023.12+ds2+~3.17.0+ds1-2) unstable; urgency=medium * d/control: Added B-D python3-nxmx * d/control: Revert orderedset -> ordered-set. orderedset is available in Debian, no diversion from upstream. -- Picca Frédéric-Emmanuel Wed, 17 Jan 2024 14:44:58 +0100 cctbx (2023.12+ds2+~3.17.0+ds1-1) unstable; urgency=medium [ Bastian Germann ] * Add missing autopkgtest dep pytest-regressions [ Neil Williams ] * Update control to remove myself from Uploaders [ Picca Frédéric-Emmanuel ] * New upstream version 2023.12+ds2+~3.17.0+ds1 * d/patches - fix the entry_points Python3.12 incompatibility - dxtbx use ordered-set instead of orderedset * d/t/dxtbx: skip nxmx test fo now * d/rules: install the serialtbx module * Bug fix: "FTBFS: boost1.83 transition", thanks to gladk@debian.org; (Closes: #1056086). * Bug fix: "FTBFS with Python 3.12", thanks to Graham Inggs (Closes: #1058039). -- Picca Frédéric-Emmanuel Tue, 09 Jan 2024 22:41:16 +0100 cctbx (2022.9+ds2+~3.11.2+ds1-6) unstable; urgency=medium * Team upload. * Move autopkgtests out into separate script files for maintainability. * Move autopkgtest setup out of the loop to support testing on multiple supported Python versions. Run the tests in separate directories. (Closes: #1027775) * Patch: Pickle support for Python 3.11. * Patch: Update find_reference_cycles test for Python 3.11. -- Stefano Rivera Sun, 08 Jan 2023 10:26:53 -0400 cctbx (2022.9+ds2+~3.11.2+ds1-5) unstable; urgency=medium * Team upload. [ Picca Frédéric-Emmanuel ] * d/control: added B-D python3-pymol [ Stefano Rivera ] * Patch: setuptools > 60 support (avoid pip breaking setuptools distutils magic). (Closes: #1024859) * Patch: Use the python3 binary when calling pip. * Depend on python3-h5py in the 2nd autopkgtest. -- Stefano Rivera Sat, 24 Dec 2022 21:14:52 -0400 cctbx (2022.9+ds2+~3.11.2+ds1-4) unstable; urgency=medium * d/rules: remove also the gui_resources in the clean target Bug fix: "FTBFS: dpkg-source: error: aborting due to unexpected upstream changes, see /tmp/cctbx_2022.9+ds2+~3.11.2+ds1-3.diff.lOjzg7", thanks to Lucas Nussbaum (Closes: #1022354). -- Picca Frédéric-Emmanuel Tue, 01 Nov 2022 08:54:57 +0100 cctbx (2022.9+ds2+~3.11.2+ds1-3) unstable; urgency=medium * build also the gltbx package - Added the gui_resources in order to build it - activate the gltbx tests * d/rules: build only on 64 bit arch * d/t/control: add verbosity to the autopkgtests * d/control: B-D libgl-dev and libglu1-mesa-dev for the gltbx * d/control: Added the gltbx description * d/control: Added libboost-python-dev and libccp4-dev to libcctbx-dev -- Picca Frédéric-Emmanuel Wed, 19 Oct 2022 14:36:39 +0200 cctbx (2022.9+ds2+~3.11.2+ds1-2) unstable; urgency=medium * d/control: B-D libann-cctbx-dev (>= 1.1.2+doc-9~) and removed libann-dev * d/pathes/*: refreshed to compile annlib with the new ANNSELF_EXCLUDE namespace -- Picca Frédéric-Emmanuel Fri, 14 Oct 2022 12:08:38 +0200 cctbx (2022.9+ds2+~3.11.2+ds1-1) unstable; urgency=medium * New upstream version 2022.9+ds2+~3.11.2+ds1 * c/control: - B-D Added python3-mrcfile - B-D python3-requests - python"-cctbx depends on libcctbx-dev. the fable code requires the headers files. * dxtbx reactivate the FormatMRC module -- Picca Frédéric-Emmanuel Thu, 06 Oct 2022 15:10:17 +0200 cctbx (2022.8+ds2+~3.11.1+ds1-2) unstable; urgency=medium * d/control: libcctbx-dev depends on libann-cctbx-dev * d/p/0017-cctbx-do-not-hide-sign-comparison.patch: to help arch port effort. * d/p/0017-dxtbx-fix-for-unsigned-char-arch.patch: try to fix the unsigned char issue on arm64, ppc64el ans s390x -- Picca Frédéric-Emmanuel Wed, 21 Sep 2022 14:04:04 +0200 cctbx (2022.8+ds2+~3.11.1+ds1-1) unstable; urgency=medium * New upstream version 2022.8+ds2+~3.11.1+ds1 * d/control: Added B-D libann-cctbx-dev * d/control: Added B-D libtiff-dev * d/control: better short/long description * d/control: Added B-D dh-sequence-[numpy|python3] * d/p/dxtbx*: import all the dxtbx patches * d/rules: built rstbx and dxtbx for dials * d/rules: avoid FTBFS when cctbx is already installed * d/watch: Added the dxtbx component -- Picca Frédéric-Emmanuel Mon, 19 Sep 2022 15:52:37 +0200 cctbx (2022.8+ds2-1) unstable; urgency=medium * d/control: Added B-D python3-pycbf >= 0.9.7+dfsg1-2~ * d/rules: Added the missing omptbx module * d/install-cctbx.sh: Install the annlib_adaptbx at the right place * d/t/control: do not run CI on 32bits architectures. * New upstream version 2022.8+ds2 -- Picca Frédéric-Emmanuel Fri, 02 Sep 2022 10:51:42 +0200 cctbx (2022.7+ds2-1) unstable; urgency=medium * New upstream version 2022.7+ds2 * More modules activated - cbflib_adaptbx * d/p/refresh the patch series * d/control: Added B-D python3-scipy to fix the autopkgtest * d/p/0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch - Modity to avoid building the local cbf and pycbf binaries - build a cbf-private shared library with the extra cbf files -- Picca Frédéric-Emmanuel Wed, 10 Aug 2022 16:15:42 +0200 cctbx (2021.12+ds1-8) unstable; urgency=medium * More modules activated - annlib_adaptbx - ccp4io - ccp4io_adaptbx - fable - mmtbx * Added missing Python extensions - iotbx_cif_ext - iotbx_mtz_ext * d/t/control: start autopkgtest from an empty directory * d/rules: activated --enable_cxx11 * d/rules: install libtbx_env under /usr/lib/cctbx/pythonX.Y * Bug fix: "FTBFS: dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2", thanks to Lucas Nussbaum (Closes: #1016324). * Bug fix: "autopkgtest failure: Please run this program in an empty directory.", thanks to Paul Gevers (Closes: #1016499). -- Picca Frédéric-Emmanuel Tue, 09 Aug 2022 17:44:07 +0200 cctbx (2021.12+ds1-7) unstable; urgency=medium * Added the boost_adaptbx module for dxtbx * Added d/libcctbx-dev.links * d/t/control: run test only with python 3.10 for now * d/setup.py: do not instal deprecated module boost (Closes: #1014941) * s/setup.py: use the right wx -> wxPython dependency * d/rules: Install all headers using rsync -- Picca Frédéric-Emmanuel Fri, 15 Jul 2022 16:29:26 +0200 cctbx (2021.12+ds1-6) unstable; urgency=medium * d/rules: make the build verbose * d/p/adding-setup.py.patch: removed setup.py is now in the debian directory * d/setup.py: a simpler version in order to install all python modules. * d/rules: use pybuild to install the generated files (scripts, librariers, extensions) * d/control: Added B-D python3-wxgtk4.0 * d/rules: install the /usr/share/cctbx files * d/rules: use nproc instread of dh_assistant for backport * d/t/control: Adding first autopkgtest -- Picca Frédéric-Emmanuel Wed, 13 Jul 2022 15:01:47 +0200 cctbx (2021.12+ds1-5) unstable; urgency=medium * Team upload. * Enable riscv64 build (Closes: #1009191). * Trim trailing whitespace. -- Andrius Merkys Mon, 02 May 2022 01:51:34 -0000 cctbx (2021.12+ds1-4) unstable; urgency=medium * Use sysconfig to obtain path to boost_python to avoid needing the python version in the system_libs patch in boost_adaptbx/SConsscript (Closes: #1008520) -- Neil Williams Tue, 29 Mar 2022 10:16:15 +0100 cctbx (2021.12+ds1-3) unstable; urgency=medium * Apply patch from reproducible builds: Timestamps embedded in boost_python_meta_ext.so.0.0.1 (Closes: #1006252) -- Neil Williams Thu, 03 Mar 2022 09:36:43 +0000 cctbx (2021.12+ds1-2) unstable; urgency=medium * Source only upload -- Neil Williams Sun, 13 Feb 2022 08:27:32 +0000 cctbx (2021.12+ds1-1) unstable; urgency=medium * Add missing scitbx header files * New upstream release. -- Neil Williams Thu, 27 Jan 2022 14:13:37 +0000 cctbx (2021.8+ds2-1) unstable; urgency=low * Initial release (Closes: #679905) -- Neil Williams Thu, 09 Dec 2021 09:56:20 +0000