cnvkit (0.9.10-2) unstable; urgency=medium * No-change rebuild of the package from experimental for unstable. -- Michael R. Crusoe Mon, 08 Apr 2024 10:42:20 +0200 cnvkit (0.9.10-2~0exp) experimental; urgency=medium * Test "Arch: all" upload to experimental * d/control: the binary package is architecture independent. * d/patches/spelling: forwarded upstream. * d/control: build the PEP-517 way with pybuild-plugin-pyproject. * d/control: also run the built-in tests as autopkgtests. * d/rules: move items into d/clean. * d/tests: skip-not-installable for s390x and others where python3- pysam isn't available. * d/control: add riscv64 to the arch list. -- Michael R. Crusoe Tue, 05 Mar 2024 10:11:04 +0100 cnvkit (0.9.10-1) unstable; urgency=medium * Team upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.2 (routine-update) * Drop Build-Depends python3-future Closes: #1059947 * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) * Use secure URI in Homepage field. [ Nilesh Patra ] * Add patch to ignore test warnings -- Andreas Tille Fri, 05 Jan 2024 16:18:13 +0100 cnvkit (0.9.9-2) unstable; urgency=medium * Team Upload. * Re-diff patches (refresh) * d/rules: do not run tests in parallel -- Nilesh Patra Fri, 15 Oct 2021 12:11:06 +0530 cnvkit (0.9.9-1) unstable; urgency=medium * Fix watchfile to detect new versions on github (routine-update) * New upstream version * Standards-Version: 4.6.0 (routine-update) * watch file standard 4 (routine-update) -- Michael R. Crusoe Mon, 13 Sep 2021 19:06:06 +0200 cnvkit (0.9.8-1) unstable; urgency=medium [ Steffen Moeller ] * Added symbolic link from /usr/lib/debian-med/bin/cnvkit.py to /usr/bin/cnvkit.py bcbio explicitly looks in /usr/bin, though. [ Michael R. Crusoe ] * New upstream version * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * debian/control: mips64el is not supported by upstream, remove it Closes: #962743 -- Michael R. Crusoe Fri, 01 Jan 2021 16:17:10 +0100 cnvkit (0.9.7-1) unstable; urgency=medium * New upstream version * Standards-Version: 4.5.0 (routine-update) * Refreshed the patches * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. -- Michael R. Crusoe Mon, 01 Jun 2020 16:19:46 +0200 cnvkit (0.9.6-3) unstable; urgency=medium * Don't run the autopkgtests in parallel. -- Michael R. Crusoe Tue, 07 Jan 2020 11:48:23 +0100 cnvkit (0.9.6-2) unstable; urgency=medium * Support more architectures (Closes: #942582) * Tests pass with the latest python3-pandas. (Closes: #944041) -- Michael R. Crusoe Wed, 13 Nov 2019 18:57:24 +0100 cnvkit (0.9.6-1) unstable; urgency=medium * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 -- Steffen Moeller Wed, 28 Aug 2019 19:31:59 +0200 cnvkit (0.9.5-3) unstable; urgency=medium * Fix buster rebuilds (Closes: #925568) d/patches/controldir.patch -- Olivier Sallou Wed, 27 Mar 2019 08:00:39 +0000 cnvkit (0.9.5-2) unstable; urgency=medium [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. [ Michael R. Crusoe ] * Remove trailing whitespace in debian/rules * Standards-Version: 4.3.0 * Run the included tests as autopkgtests. * Mark cnv_expression_correlate as a script * amd64 only, due to the realities of where python-pysam is available. -- Michael R. Crusoe Sun, 06 Jan 2019 04:12:46 -0800 cnvkit (0.9.5-1) unstable; urgency=medium * Team upload. * New upstream version * debhelper 11 * Standards-Version: 4.2.0 -- Andreas Tille Mon, 13 Aug 2018 13:02:24 +0200 cnvkit (0.9.3-2) unstable; urgency=medium * Add missing build-dep on python3-future. (Closes: #901877) * debian/rules: fix override_dh_auto_test-does-not-check-DEB_BUILD_OPTIONS -- Michael R. Crusoe Tue, 19 Jun 2018 15:05:43 -0700 cnvkit (0.9.3-1) unstable; urgency=medium * New upstream version. * Initial release. (Closes: #828176) * Policy 4.1.4 compliance * Moved to python3 * Cleaning test tmp results -- Steffen Moeller Fri, 15 Jun 2018 12:03:11 +0200 cnvkit (0.9.0-1) UNRELEASED; urgency=medium * Debianisation. -- Michael R. Crusoe Sat, 25 Jun 2016 10:57:17 -0700