Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: DOLFIN Upstream-Contact: fenics@fenicsproject.org http://fenicsproject.org/support/ Source: http://launchpad.net/dolfin Files: bench/bench.py bench/common/progress/cpp/main.cpp bench/common/timing/cpp/main.cpp bench/fem/assembly/cpp/forms.h bench/fem/convergence/cpp/forms/Poisson2D_1.ufl bench/fem/convergence/cpp/forms/Poisson2D_2.ufl bench/fem/convergence/cpp/forms/Poisson2D_3.ufl bench/fem/convergence/cpp/forms/Poisson2D_4.ufl bench/fem/convergence/cpp/forms/Poisson2D_5.ufl bench/fem/convergence/cpp/forms/Poisson3D_1.ufl bench/fem/convergence/cpp/forms/Poisson3D_2.ufl bench/fem/convergence/cpp/forms/Poisson3D_3.ufl bench/fem/convergence/cpp/forms/Poisson3D_4.ufl bench/fem/convergence/cpp/forms/Poisson3D_5.ufl bench/fem/convergence/cpp/main.cpp bench/fem/jit/python/bench_fem_jit_python bench/fem/multicore/cpp/main.cpp bench/fem/speedup/cpp/Poisson.ufl bench/fem/speedup/cpp/analyse-bench bench/fem/speedup/cpp/assemble-poisson.cpp bench/fem/speedup/cpp/bench_fem_speedup_cpp bench/fem/speedup/cpp/solve-poisson.cpp bench/la/cusp/python/bench_la_cusp_python bench/la/vector/access/cpp/main.cpp bench/mesh/iteration/cpp/main.cpp bench/mesh/refinement/cpp/main.cpp bench/mesh/topology/cpp/main.cpp bench/mesh/unitcube/cpp/main.cpp cmake/scripts/generate-form-files demo/la/eigenvalue/cpp/StiffnessMatrix.ufl demo/pde/navier-stokes/cpp/PressureUpdate.ufl demo/pde/navier-stokes/cpp/TentativeVelocity.ufl demo/pde/navier-stokes/cpp/VelocityUpdate.ufl demo/pde/navier-stokes/cpp/main.cpp demo/pde/navier-stokes/python/demo_navier-stokes.py demo/pde/poisson/cpp/Poisson.ufl demo/pde/poisson/cpp/main.cpp demo/pde/poisson/python/demo_poisson.py demo/pde/stokes-iterative/cpp/Stokes.ufl demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.ufl demo/undocumented/advection-diffusion/cpp/main.cpp demo/undocumented/bcs/cpp/Poisson.ufl demo/undocumented/bcs/cpp/main.cpp demo/undocumented/bcs/python/demo_bcs.py demo/undocumented/block-matrix/cpp/StiffnessMatrix.ufl demo/undocumented/csg/2D/cpp/main.cpp demo/undocumented/csg/3D/cpp/main.cpp demo/undocumented/elementplot/python/demo_elementplot.py demo/undocumented/eval/cpp/Projection.ufl demo/undocumented/eval/cpp/main.cpp demo/undocumented/eval/python/demo_eval.py demo/undocumented/extrapolation/cpp/main.cpp demo/undocumented/extrapolation/python/demo_extrapolation.py demo/undocumented/functional/cpp/EnergyNorm.ufl demo/undocumented/functional/cpp/main.cpp demo/undocumented/interpolation/python/demo_interpolation.py demo/undocumented/lift-drag/cpp/Functionals.ufl demo/undocumented/lift-drag/cpp/main.cpp demo/undocumented/multidomain/cpp/MultiDomainPoisson.ufl demo/undocumented/multidomain/cpp/main.cpp demo/undocumented/neumann-poisson/cpp/Poisson.ufl demo/undocumented/optimization/python/demo_optimization.py demo/undocumented/periodic/cpp/Poisson.ufl demo/undocumented/periodic/cpp/main.cpp demo/undocumented/plot/cpp/main.cpp demo/undocumented/plot/python/demo_plot.py demo/undocumented/projection-interpolation/python/demo_projection-interpolation.py demo/undocumented/refinement/cpp/main.cpp demo/undocumented/refinement/python/demo_refinement.py demo/undocumented/restriction/cpp/Poisson.ufl demo/undocumented/restriction/cpp/main.cpp demo/undocumented/smoothing/python/demo_smoothing.py demo/undocumented/stokes-stabilized/cpp/Stokes.ufl demo/undocumented/stokes-stabilized/cpp/main.cpp demo/undocumented/stokes-taylor-hood/cpp/Stokes.ufl demo/undocumented/stokes-taylor-hood/cpp/main.cpp demo/undocumented/subdomains/cpp/main.cpp demo/undocumented/submesh/cpp/main.cpp demo/undocumented/submesh/python/demo_submesh.py demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl demo/undocumented/sym-dirichlet-bc/cpp/main.cpp demo/undocumented/tensor-weighted-poisson/python/demo_tensor-weighted-poisson.py demo/undocumented/tensor-weighted-poisson/python/generate_data.py demo/undocumented/time-series/cpp/main.cpp demo/undocumented/time-series/python/demo_time-series.py dolfin/adaptivity/Extrapolation.cpp dolfin/adaptivity/Extrapolation.h dolfin/adaptivity/TimeSeries.cpp dolfin/adaptivity/TimeSeries.h dolfin/ale/HarmonicSmoothing.h dolfin/ale/Poisson1D.ufl dolfin/ale/Poisson2D.ufl dolfin/ale/Poisson3D.ufl dolfin/common/Hierarchical.h dolfin/common/IndexSet.h dolfin/common/Timer.h dolfin/common/Variable.cpp dolfin/common/Variable.h dolfin/common/constants.h dolfin/common/dolfin_doc.h dolfin/common/init.cpp dolfin/common/init.h dolfin/common/timing.cpp dolfin/common/timing.h dolfin/common/types.h dolfin/common/unittest.h dolfin/common/utils.cpp dolfin/common/utils.h dolfin/fem/Assembler.cpp dolfin/fem/Assembler.h dolfin/fem/AssemblerBase.cpp dolfin/fem/AssemblerBase.h dolfin/fem/BasisFunction.h dolfin/fem/BoundaryCondition.cpp dolfin/fem/BoundaryCondition.h dolfin/fem/DomainAssigner.cpp dolfin/fem/DomainAssigner.h dolfin/fem/Equation.cpp dolfin/fem/Equation.h dolfin/fem/FiniteElement.cpp dolfin/fem/Form.h dolfin/fem/LinearTimeDependentProblem.cpp dolfin/fem/LinearTimeDependentProblem.h dolfin/fem/LinearVariationalProblem.cpp dolfin/fem/LinearVariationalProblem.h dolfin/fem/NonlinearVariationalProblem.cpp dolfin/fem/NonlinearVariationalProblem.h dolfin/fem/OpenMpAssembler.h dolfin/fem/PointSource.cpp dolfin/fem/PointSource.h dolfin/fem/UFC.cpp dolfin/fem/UFC.h dolfin/fem/UFCCell.h dolfin/fem/assemble.cpp dolfin/fem/assemble.h dolfin/fem/solve.cpp dolfin/fem/solve.h dolfin/function/CoefficientAssigner.cpp dolfin/function/CoefficientAssigner.h dolfin/function/Constant.cpp dolfin/function/Constant.h dolfin/function/Expression.cpp dolfin/function/Expression.h dolfin/function/Function.cpp dolfin/function/Function.h dolfin/function/FunctionSpace.cpp dolfin/function/FunctionSpace.h dolfin/function/GenericFunction.cpp dolfin/function/GenericFunction.h dolfin/function/SpecialFunctions.cpp dolfin/function/SpecialFunctions.h dolfin/function/SubSpace.cpp dolfin/function/SubSpace.h dolfin/generation/BoxMesh.cpp dolfin/generation/BoxMesh.h dolfin/generation/CSGGeometry.cpp dolfin/generation/CSGGeometry.h dolfin/generation/CSGOperators.cpp dolfin/generation/CSGOperators.h dolfin/generation/CSGPrimitive.h dolfin/generation/CSGPrimitives2D.cpp dolfin/generation/CSGPrimitives2D.h dolfin/generation/CSGPrimitives3D.cpp dolfin/generation/CSGPrimitives3D.h dolfin/generation/RectangleMesh.cpp dolfin/generation/RectangleMesh.h dolfin/generation/UnitCircleMesh.cpp dolfin/generation/UnitCircleMesh.h dolfin/generation/UnitCubeMesh.h dolfin/generation/UnitSquareMesh.h dolfin/generation/UnitTetrahedronMesh.cpp dolfin/generation/UnitTetrahedronMesh.h dolfin/generation/UnitTriangleMesh.cpp dolfin/generation/UnitTriangleMesh.h dolfin/io/BinaryFile.cpp dolfin/io/BinaryFile.h dolfin/io/SVGFile.cpp dolfin/io/SVGFile.h dolfin/io/XMLMeshValueCollection.h dolfin/io/xmlutils.cpp dolfin/io/xmlutils.h dolfin/la/DefaultFactory.cpp dolfin/la/DefaultFactory.h dolfin/la/GenericLinearOperator.h dolfin/la/GenericMatrix.cpp dolfin/la/GenericTensor.h dolfin/la/LinearOperator.cpp dolfin/la/LinearOperator.h dolfin/la/LinearSolver.cpp dolfin/la/PETScBaseMatrix.h dolfin/la/PETScLUSolver.cpp dolfin/la/PETScLUSolver.h dolfin/la/STLMatrix.h dolfin/la/Scalar.h dolfin/la/TensorProductMatrix.cpp dolfin/la/TensorProductMatrix.h dolfin/la/TensorProductVector.cpp dolfin/la/TensorProductVector.h dolfin/la/solve.cpp dolfin/la/solve.h dolfin/la/uBLASDummyPreconditioner.cpp dolfin/la/uBLASDummyPreconditioner.h dolfin/la/uBLASLinearOperator.cpp dolfin/la/uBLASLinearOperator.h dolfin/log/Event.cpp dolfin/log/Event.h dolfin/log/LogManager.cpp dolfin/log/LogManager.h dolfin/log/LogStream.cpp dolfin/log/LogStream.h dolfin/log/Logger.cpp dolfin/log/Logger.h dolfin/log/Progress.cpp dolfin/log/Table.cpp dolfin/log/Table.h dolfin/log/log.cpp dolfin/math/Lagrange.cpp dolfin/math/Lagrange.h dolfin/math/Legendre.cpp dolfin/math/basic.cpp dolfin/math/basic.h dolfin/mesh/BoundaryMesh.cpp dolfin/mesh/BoundaryMesh.h dolfin/mesh/Cell.h dolfin/mesh/CellType.cpp dolfin/mesh/CellType.h dolfin/mesh/DomainBoundary.h dolfin/mesh/DynamicMeshEditor.cpp dolfin/mesh/DynamicMeshEditor.h dolfin/mesh/Edge.cpp dolfin/mesh/Edge.h dolfin/mesh/Face.cpp dolfin/mesh/Face.h dolfin/mesh/Facet.cpp dolfin/mesh/Facet.h dolfin/mesh/FacetCell.cpp dolfin/mesh/FacetCell.h dolfin/mesh/IntervalCell.cpp dolfin/mesh/IntervalCell.h dolfin/mesh/Mesh.cpp dolfin/mesh/Mesh.h dolfin/mesh/MeshConnectivity.cpp dolfin/mesh/MeshConnectivity.h dolfin/mesh/MeshData.cpp dolfin/mesh/MeshData.h dolfin/mesh/MeshDomains.cpp dolfin/mesh/MeshDomains.h dolfin/mesh/MeshEditor.cpp dolfin/mesh/MeshEditor.h dolfin/mesh/MeshEntity.cpp dolfin/mesh/MeshEntity.h dolfin/mesh/MeshEntityIterator.h dolfin/mesh/MeshFunction.h dolfin/mesh/MeshGeometry.cpp dolfin/mesh/MeshGeometry.h dolfin/mesh/MeshOrdering.cpp dolfin/mesh/MeshOrdering.h dolfin/mesh/MeshRenumbering.cpp dolfin/mesh/MeshRenumbering.h dolfin/mesh/MeshSmoothing.cpp dolfin/mesh/MeshSmoothing.h dolfin/mesh/MeshTopology.cpp dolfin/mesh/MeshTopology.h dolfin/mesh/MeshTransformation.cpp dolfin/mesh/MeshTransformation.h dolfin/mesh/Point.cpp dolfin/mesh/Point.h dolfin/mesh/Restriction.cpp dolfin/mesh/Restriction.h dolfin/mesh/SubDomain.cpp dolfin/mesh/SubDomain.h dolfin/mesh/SubMesh.cpp dolfin/mesh/SubMesh.h dolfin/mesh/SubsetIterator.h dolfin/mesh/TetrahedronCell.cpp dolfin/mesh/TetrahedronCell.h dolfin/mesh/TopologyComputation.cpp dolfin/mesh/TopologyComputation.h dolfin/mesh/TriangleCell.cpp dolfin/mesh/TriangleCell.h dolfin/mesh/Vertex.h dolfin/parameter/GlobalParameters.cpp dolfin/parameter/GlobalParameters.h dolfin/parameter/Parameter.cpp dolfin/parameter/Parameter.h dolfin/parameter/Parameters.cpp dolfin/parameter/Parameters.h dolfin/refinement/LocalMeshRefinement.cpp dolfin/refinement/LocalMeshRefinement.h dolfin/refinement/RegularCutRefinement.cpp dolfin/refinement/RegularCutRefinement.h dolfin/refinement/UniformMeshRefinement.cpp dolfin/refinement/UniformMeshRefinement.h dolfin/swig/fem/pre.i dolfin/swig/function/pre.i dolfin/swig/mesh/post.i dolfin/swig/mesh/pre.i dolfin/swig/typemaps/primitives.i scripts/dolfin-convert/dolfin-convert scripts/dolfin-order/dolfin-order scripts/dolfin-plot/dolfin-plot site-packages/dolfin/common/globalparameters.py.in site-packages/dolfin/common/memory.py site-packages/dolfin/deprecation.py site-packages/dolfin/fem/assembling.py site-packages/dolfin/fem/bcs.py site-packages/dolfin/fem/interpolation.py site-packages/dolfin/fem/norms.py site-packages/dolfin/fem/projection.py site-packages/dolfin/fem/solving.py site-packages/dolfin/fem/variationalproblem.py site-packages/dolfin/functions/constant.py site-packages/dolfin/functions/specialfunctions.py site-packages/dolfin/mesh/ale.py site-packages/dolfin/mesh/meshes.py site-packages/dolfin/mesh/refinement.py site-packages/dolfin_utils/commands.py site-packages/dolfin_utils/documentation/docstringutils.py site-packages/dolfin_utils/documentation/extractdocumentation.py site-packages/dolfin_utils/meshconvert/meshconvert.py test/codingstyle/test.py test/system/parallel-assembly-solve/solver.py test/system/parallel-assembly-solve/test.py test/system/test.py test/test.py test/unit/book/python/chapter_10.py test/unit/book/python/original_tests/chapter_10.py.orig test/unit/fem/python/solving.py test/unit/function/cpp/Expression.cpp test/unit/function/cpp/Projection.ufl test/unit/function/python/Constant.py test/unit/function/python/Expression.py test/unit/io/python/SVG.py test/unit/io/python/XMLLocalMeshData.py test/unit/io/python/XMLMeshValueCollection.py test/unit/jit/python/test.py test/unit/la/cpp/LinearOperator.cpp test/unit/la/cpp/forms/ReactionDiffusion.ufl test/unit/la/cpp/forms/ReactionDiffusionAction.ufl test/unit/la/python/LinearOperator.py test/unit/mesh/cpp/Mesh.cpp test/unit/mesh/cpp/MeshValueCollection.cpp test/unit/mesh/python/Mesh.py test/unit/mesh/python/MeshData.py test/unit/mesh/python/MeshEditor.py test/unit/mesh/python/MeshIterator.py test/unit/mesh/python/MeshMarkers.py test/unit/mesh/python/MeshTransformation.py test/unit/mesh/python/SubMesh.py test/unit/parameter/cpp/Parameters.cpp test/unit/parameter/python/Parameters.py test/unit/python-extras/python/test.py test/unit/test.py utils/matlab/meshindex.m utils/matlab/plotcontroller.m utils/python/extract2d utils/scripts/formatcode utils/scripts/plotklocs utils/system/monitor utils/tetgen/dolfin-tetgen utils/xml/convertall Copyright: 2003-2005, Anders Logg 2003-2006, Anders Logg 2003-2007, Anders Logg 2003-2008, Anders Logg 2003-2009, Anders Logg 2003-2011, Anders Logg 2003-2012, Anders Logg 2003-2013, Anders Logg 2004-2005, Anders Logg 2004-2007, Anders Logg 2005, Anders Logg 2005-2006, Anders Logg 2005-2007, Anders Logg 2005-2008, Anders Logg 2005-2009, Anders Logg 2005-2010, Anders Logg 2005-2011, Anders Logg 2005-2012, Anders Logg 2006, Anders Logg 2006-2007, Anders Logg 2006-2008, Anders Logg 2006-2009, Anders Logg 2006-2010, Anders Logg 2006-2011, Anders Logg 2006-2012, Anders Logg 2006-2013, Anders Logg 2007, Anders Logg 2007-2008, Anders Logg 2007-2009, Anders Logg 2007-2011, Anders Logg 2007-2012, Anders Logg 2007-2013, Anders Logg 2008, Anders Logg 2008-2009, Anders Logg 2008-2010, Anders Logg 2008-2011, Anders Logg 2008-2012, Anders Logg 2009, Anders Logg 2009-2010, Anders Logg 2009-2011, Anders Logg 2009-2012, Anders Logg 2009-2013, Anders Logg 2010, Anders Logg 2010-2011, Anders Logg 2010-2012, Anders Logg 2011, Anders Logg 2012, Anders Logg 2013, Anders Logg License: LGPL-3+ Files: bench/function/evaluation/cpp/P1.ufl bench/la/vector/assignment/cpp/main.cpp cmake/scripts/generate-cmakefiles demo/pde/cahn-hilliard/cpp/CahnHilliard2D.ufl demo/pde/cahn-hilliard/cpp/CahnHilliard3D.ufl demo/pde/cahn-hilliard/cpp/main.cpp demo/pde/cahn-hilliard/python/demo_cahn-hilliard.py demo/pde/stokes-iterative/cpp/StokesPreconditioner.ufl demo/pde/stokes-iterative/cpp/main.cpp demo/pde/stokes-iterative/python/demo_stokes-iterative.py demo/undocumented/advection-diffusion/cpp/Velocity.ufl demo/undocumented/built-in/python/demo_built-in.py demo/undocumented/coloring/cpp/main.cpp demo/undocumented/coloring/python/demo_coloring.py demo/undocumented/dg-advection-diffusion/cpp/Velocity.ufl demo/undocumented/elastodynamics/python/demo_elastodynamics.py demo/undocumented/mesh-generation/cpp/main.cpp demo/undocumented/mesh-generation/python/demo_mesh_generation.py demo/undocumented/nonlinear-poisson/cpp/NonlinearPoisson.ufl demo/undocumented/nonlinear-poisson/cpp/main.cpp demo/undocumented/nonmatching-interpolation/cpp/P1.ufl demo/undocumented/nonmatching-interpolation/cpp/P3.ufl demo/undocumented/nonmatching-interpolation/cpp/main.cpp demo/undocumented/nonmatching-interpolation/python/demo_nonmatching-interpolation.py demo/undocumented/nonmatching-projection/cpp/P1_projection.ufl demo/undocumented/nonmatching-projection/cpp/P3.ufl demo/undocumented/nonmatching-projection/cpp/main.cpp demo/undocumented/nonmatching-projection/python/demo_nonmatching-projection.py demo/undocumented/singular/cpp/Poisson.ufl demo/undocumented/singular/cpp/main.cpp demo/undocumented/triangulate/cpp/main.cpp demo/undocumented/triangulate/python/demo_triangulate.py dolfin/common/Array.h dolfin/common/NoDeleter.h dolfin/common/Set.h dolfin/common/SubSystemsManager.cpp dolfin/common/SubSystemsManager.h dolfin/common/UniqueIdGenerator.cpp dolfin/common/UniqueIdGenerator.h dolfin/fem/Form.cpp dolfin/fem/LocalSolver.cpp dolfin/fem/LocalSolver.h dolfin/fem/OpenMpAssembler.cpp dolfin/fem/SparsityPatternBuilder.cpp dolfin/fem/SparsityPatternBuilder.h dolfin/generation/CGALMeshBuilder.h dolfin/generation/PolygonalMeshGenerator.cpp dolfin/generation/PolygonalMeshGenerator.h dolfin/generation/PolyhedralMeshGenerator.cpp dolfin/generation/PolyhedralMeshGenerator.h dolfin/generation/Triangulate.cpp dolfin/generation/Triangulate.h dolfin/graph/BoostGraphColoring.cpp dolfin/graph/BoostGraphColoring.h dolfin/graph/BoostGraphOrdering.cpp dolfin/graph/BoostGraphOrdering.h dolfin/graph/Graph.h dolfin/graph/GraphBuilder.cpp dolfin/graph/GraphBuilder.h dolfin/graph/GraphColoring.cpp dolfin/graph/GraphColoring.h dolfin/graph/GraphOrdering.cpp dolfin/graph/GraphOrdering.h dolfin/graph/SCOTCH.cpp dolfin/graph/SCOTCH.h dolfin/graph/ZoltanInterface.cpp dolfin/graph/ZoltanInterface.h dolfin/io/Encoder.h dolfin/io/RAWFile.cpp dolfin/io/RAWFile.h dolfin/io/VTKFile.cpp dolfin/io/VTKFile.h dolfin/io/VTKWriter.cpp dolfin/io/VTKWriter.h dolfin/io/XMLArray.h dolfin/io/XMLFile.h dolfin/io/XMLFunctionData.cpp dolfin/io/XMLFunctionData.h dolfin/io/XMLMesh.cpp dolfin/io/XMLMesh.h dolfin/io/XMLMeshFunction.h dolfin/io/XMLParameters.cpp dolfin/io/XMLVector.cpp dolfin/io/XMLVector.h dolfin/io/XYZFile.cpp dolfin/io/XYZFile.h dolfin/la/CoordinateMatrix.cpp dolfin/la/CoordinateMatrix.h dolfin/la/GenericLUSolver.h dolfin/la/GenericLinearSolver.cpp dolfin/la/GenericLinearSolver.h dolfin/la/GenericMatrix.h dolfin/la/GenericPreconditioner.h dolfin/la/GenericVector.h dolfin/la/KrylovSolver.cpp dolfin/la/KrylovSolver.h dolfin/la/LUSolver.cpp dolfin/la/LUSolver.h dolfin/la/MUMPSLUSolver.cpp dolfin/la/MUMPSLUSolver.h dolfin/la/PETScObject.h dolfin/la/PETScPreconditioner.cpp dolfin/la/PETScPreconditioner.h dolfin/la/PaStiXLUSolver.cpp dolfin/la/PaStiXLUSolver.h dolfin/la/SLEPcEigenSolver.cpp dolfin/la/SLEPcEigenSolver.h dolfin/la/STLFactoryCSC.cpp dolfin/la/STLFactoryCSC.h dolfin/la/STLVector.h dolfin/la/SparsityPattern.cpp dolfin/la/SparsityPattern.h dolfin/la/TensorLayout.cpp dolfin/la/TensorLayout.h dolfin/la/TrilinosPreconditioner.cpp dolfin/la/TrilinosPreconditioner.h dolfin/la/UmfpackLUSolver.cpp dolfin/la/UmfpackLUSolver.h dolfin/la/Vector.h dolfin/la/uBLASDenseMatrix.h dolfin/la/uBLASILUPreconditioner.cpp dolfin/la/uBLASILUPreconditioner.h dolfin/la/uBLASKrylovSolver.cpp dolfin/la/uBLASKrylovSolver.h dolfin/la/uBLASMatrix.h dolfin/la/uBLASPreconditioner.h dolfin/la/uBLASSparseMatrix.h dolfin/la/uBLASVector.cpp dolfin/la/uBLASVector.h dolfin/la/ublas.h dolfin/math/Legendre.h dolfin/mesh/DistributedMeshTools.cpp dolfin/mesh/DistributedMeshTools.h dolfin/mesh/LocalMeshValueCollection.h dolfin/mesh/MeshColoring.cpp dolfin/mesh/MeshColoring.h dolfin/mesh/MeshEntityIteratorBase.h dolfin/mesh/PeriodicBoundaryComputation.cpp dolfin/mesh/PeriodicBoundaryComputation.h dolfin/nls/NewtonSolver.cpp dolfin/nls/NewtonSolver.h dolfin/nls/NonlinearProblem.h dolfin/refinement/refine.cpp dolfin/refinement/refine.h site-packages/dolfin/common/time.py site-packages/dolfin_utils/meshconvert/xml_writer.py test/unit/armadillo/cpp/test.cpp.temporarily_disabled test/unit/fem/python/Assembler.py test/unit/fem/python/DirichletBC.py test/unit/fem/python/DofMap.py test/unit/fem/python/FiniteElement.py test/unit/fem/python/LocalSolver.py test/unit/fem/python/PeriodicBC.py test/unit/fem/python/SystemAssembler.py test/unit/io/python/HDF5.py test/unit/io/python/XDMF.py test/unit/io/python/XMLMesh.py test/unit/io/python/XMLMeshFunction.py test/unit/io/python/XMLVector.py test/unit/io/python/vtk.py test/unit/la/python/Matrix.py test/unit/la/python/Scalar.py test/unit/la/python/Vector.py test/unit/la/python/solve.py test/unit/mesh/python/BoundaryMesh.py test/unit/mesh/python/Edge.py test/unit/mesh/python/Face.py test/unit/mesh/python/MeshFunction.py test/unit/refinement/python/refine.py Copyright: 2005, Garth N. Wells 2005-2007, Garth N. Wells 2005-2008, Garth N. Wells 2005-2009, Garth N. Wells 2005-2011, Garth N. Wells 2006, Garth N. Wells 2006-2007, Garth N. Wells 2006-2008, Garth N. Wells 2006-2009, Garth N. Wells 2006-2010, Garth N. Wells 2006-2011, Garth N. Wells 2007, Garth N. Wells 2007-2009, Garth N. Wells 2007-2010, Garth N. Wells 2007-2011, Garth N. Wells 2008, Garth N. Wells 2008-2010, Garth N. Wells 2008-2011, Garth N. Wells 2008-2012, Garth N. Wells 2008-2013, Garth N. Wells 2009, Garth N. Wells 2009-2011, Garth N. Wells 2009-2012, Garth N. Wells 2010, Garth N. Wells 2010-2011, Garth N. Wells 2010-2013, Garth N. Wells 2011, Garth N. Wells 2011-2012, Garth N. Wells 2011-2013, Garth N. Wells 2012, Garth N. Wells 2013, Garth N. Wells License: LGPL-3+ Files: bench/fem/speedup/cpp/submit-bench demo/undocumented/dg-advection-diffusion/python/demo_dg-advection-diffusion.py dolfin/common/defines.cpp dolfin/common/defines.h dolfin/swig/adaptivity/imports.i dolfin/swig/adaptivity/includes.i dolfin/swig/adaptivity/local_imports.i dolfin/swig/adaptivity/post.i dolfin/swig/ale/pre.i dolfin/swig/common/post.i dolfin/swig/common/pre.i dolfin/swig/fem/imports.i dolfin/swig/fem/includes.i dolfin/swig/fem/local_imports.i dolfin/swig/fem/post.i dolfin/swig/forwarddeclarations.i dolfin/swig/function/imports.i dolfin/swig/function/includes.i dolfin/swig/function/local_imports.i dolfin/swig/function/post.i dolfin/swig/globalincludes.i dolfin/swig/io/pre.i dolfin/swig/la/Indices.i dolfin/swig/la/la_get_set_items.i dolfin/swig/log/post.i dolfin/swig/log/pre.i dolfin/swig/mesh/imports.i dolfin/swig/mesh/includes.i dolfin/swig/mesh/local_imports.i dolfin/swig/modules/common/module.i dolfin/swig/modules/fem/module.i dolfin/swig/modules/function/module.i dolfin/swig/modules/io/module.i dolfin/swig/modules/la/module.i dolfin/swig/modules/mesh/module.i dolfin/swig/nls/pre.i dolfin/swig/parameter/post.i dolfin/swig/parameter/pre.i dolfin/swig/shared_ptr_classes.i dolfin/swig/typemaps/array.i dolfin/swig/typemaps/includes.i dolfin/swig/typemaps/std_map.i dolfin/swig/typemaps/std_pair.i dolfin/swig/typemaps/std_vector.i dolfin/swig/version.i site-packages/dolfin/compilemodules/compilemodule.py site-packages/dolfin/compilemodules/jit.py site-packages/dolfin/cpp/__init__.py site-packages/dolfin/fem/form.py site-packages/dolfin/functions/expression.py site-packages/dolfin/functions/function.py site-packages/dolfin/functions/functionspace.py site-packages/dolfin/mesh/intersect.py site-packages/dolfin_utils/cppparser/utils.py site-packages/dolfin_utils/pjobs/sge.py test/unit/fem/python/Form.py test/unit/function/python/FunctionSpace.py test/unit/la/cpp/Vector.cpp test/unit/la/python/KrylovSolver.py test/unit/la/python/test.py test/unit/mesh/python/MeshValueCollection.py Copyright: 2006-2009, Johan Hake 2007, Johan Hake 2007-2009, Johan Hake 2007-2012, Johan Hake 2008, Johan Hake 2008-2009, Johan Hake 2008-2011, Johan Hake 2009, Johan Hake 2009-2011, Johan Hake 2011, Johan Hake 2012, Johan Hake License: LGPL-3+ Files: cmake/scripts/codeexamples.py demo/la/eigenvalue/python/demo_eigenvalue.py demo/pde/biharmonic/cpp/main.cpp demo/pde/biharmonic/python/demo_biharmonic.py demo/pde/mixed-poisson/python/demo_mixed-poisson.py demo/undocumented/advection-diffusion/python/demo_advection-diffusion.py demo/undocumented/built-in/cpp/main.cpp demo/undocumented/conditional/cpp/Conditional.ufl demo/undocumented/conditional/cpp/main.cpp demo/undocumented/conditional/python/demo_conditional.py demo/undocumented/dg-advection-diffusion/cpp/Projection.ufl demo/undocumented/dg-poisson/python/demo_dg-poisson.py demo/undocumented/elasticity/python/demo_elasticity.py demo/undocumented/functional/python/demo_functional.py demo/undocumented/lift-drag/python/demo_lift-drag.py demo/undocumented/meshfunction/python/demo_meshfunction.py demo/undocumented/nonlinear-poisson/python/demo_nonlinear-poisson.py demo/undocumented/periodic/python/demo_periodic.py demo/undocumented/poisson1D-in-2D/cpp/Poisson.ufl demo/undocumented/poisson1D/cpp/Poisson.ufl demo/undocumented/poisson1D/cpp/main.cpp demo/undocumented/poisson1D/python/demo_poisson1D.py demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl demo/undocumented/spatial-coordinates/cpp/main.cpp demo/undocumented/spatial-coordinates/python/demo_spatial-coordinates.py demo/undocumented/stokes-mini/python/demo_stokes-mini.py demo/undocumented/stokes-stabilized/python/demo_stokes-stabilized.py demo/undocumented/stokes-taylor-hood/python/demo_stokes-taylor-hood.py demo/undocumented/subdomains/python/demo_subdomains.py dolfin/generation/IntervalMesh.cpp dolfin/generation/IntervalMesh.h dolfin/generation/UnitIntervalMesh.h dolfin/mesh/PointCell.cpp dolfin/mesh/PointCell.h dolfin/swig/adaptivity/docstrings.i dolfin/swig/ale/docstrings.i dolfin/swig/common/docstrings.i dolfin/swig/fem/docstrings.i dolfin/swig/function/docstrings.i dolfin/swig/generation/docstrings.i dolfin/swig/graph/docstrings.i dolfin/swig/intersection/docstrings.i dolfin/swig/io/docstrings.i dolfin/swig/la/docstrings.i dolfin/swig/log/docstrings.i dolfin/swig/math/docstrings.i dolfin/swig/mesh/docstrings.i dolfin/swig/nls/docstrings.i dolfin/swig/parameter/docstrings.i dolfin/swig/plot/docstrings.i dolfin/swig/quadrature/docstrings.i dolfin/swig/refinement/docstrings.i site-packages/dolfin_utils/documentation/generatepythonrst.py test/documentation/verify_demo_code_snippets.py test/unit/function/python/SpecialFunctions.py Copyright: 2007, Kristian B. Oelgaard 2007-2007, Kristian B. Oelgaard 2007-2008, Kristian B. Oelgaard 2008, Kristian B. Oelgaard 2009, Kristian B. Oelgaard 2010, Kristian B. Oelgaard 2011, Kristian B. Oelgaard 2012, Kristian B. Oelgaard License: LGPL-3+ Files: bench/function/extrapolation/python/bench_function_extrapolation_python demo/pde/subdomains-poisson/python/demo_subdomains-poisson.py demo/undocumented/auto-adaptive-navier-stokes/cpp/AdaptiveNavierStokes.ufl demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp demo/undocumented/auto-adaptive-navier-stokes/python/demo_auto-adaptive-navier-stokes.py demo/undocumented/extrapolation/python/demo2.py demo/undocumented/meshfunction-refinement/cpp/main.cpp demo/undocumented/mixed-poisson-sphere/python/demo_mixed-poisson-sphere.py demo/undocumented/neumann-poisson/cpp/main.cpp demo/undocumented/neumann-poisson/python/demo_neumann-poisson.py doc/copy_and_split_demo_doc.py doc/generate_api_doc.py doc/generate_main_index.py dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp dolfin/adaptivity/AdaptiveLinearVariationalSolver.h dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.h dolfin/adaptivity/ErrorControl.cpp dolfin/adaptivity/ErrorControl.h dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp dolfin/adaptivity/GenericAdaptiveVariationalSolver.h dolfin/adaptivity/GoalFunctional.cpp dolfin/adaptivity/GoalFunctional.h dolfin/adaptivity/LocalAssembler.cpp dolfin/adaptivity/LocalAssembler.h dolfin/adaptivity/adaptivesolve.cpp dolfin/adaptivity/adaptivesolve.h dolfin/adaptivity/marking.cpp dolfin/adaptivity/marking.h dolfin/function/SpecialFacetFunction.cpp dolfin/function/SpecialFacetFunction.h dolfin/swig/adaptivity/pre.i site-packages/dolfin/fem/adaptivesolving.py site-packages/dolfin/fem/errorcontrolgenerator.py site-packages/dolfin/fem/formmanipulations.py site-packages/dolfin_utils/wrappers/form.py site-packages/dolfin_utils/wrappers/functionspace.py site-packages/dolfin_utils/wrappers/goalfunctional.py site-packages/dolfin_utils/wrappers/wrappers.py test/documentation/test.py test/system/ufl-jit-assemble-chain/form_operations.py test/system/ufl-jit-assemble-chain/test.py test/unit/adaptivity/python/TimeSeries.py test/unit/adaptivity/python/errorcontrol.py Copyright: 2010, Marie E. Rognes 2010--2012, Marie E. Rognes 2010-2012, Marie E. Rognes 2011, Marie E. Rognes 2012, Marie E. Rognes License: LGPL-3+ Files: bench/function/evaluation/cpp/main.cpp demo/undocumented/distancequeries/cpp/main.cpp demo/undocumented/entityintersection/cpp/main.cpp demo/undocumented/entityintersection/python/demo_entityintersection.py demo/undocumented/meshintersection/3D/python/demo_meshintersection_3D.py dolfin/intersection/IntersectionOperator.cpp dolfin/intersection/IntersectionOperator.h dolfin/intersection/IntersectionOperatorImplementation.h dolfin/intersection/MeshPrimitive.h dolfin/intersection/Point_3_Bbox_3_intersection.h dolfin/intersection/Point_3_Iso_Cuboid_3_intersection.h dolfin/intersection/Point_3_Line_3_intersection.h dolfin/intersection/Point_3_Point_3_intersection.h dolfin/intersection/Point_3_Ray_3_intersection.h dolfin/intersection/Point_3_Segment_3_intersection.h dolfin/intersection/Point_3_Tetrahedron_3_intersection.h dolfin/intersection/Point_3_Triangle_3_intersection.h dolfin/intersection/PrimitiveIntersector.cpp dolfin/intersection/PrimitiveIntersector.h dolfin/intersection/PrimitiveTraits.h dolfin/intersection/Segment_3_Segment_3_intersection.h dolfin/intersection/Segment_3_Tetrahedron_3_intersection.h dolfin/intersection/Tetrahedron_3_Bbox_3_intersection.h dolfin/intersection/Tetrahedron_3_Tetrahedron_3_intersection.h dolfin/intersection/Tree_Traits.h dolfin/intersection/Triangle_3_Tetrahedron_3_do_intersect_SCK.cpp dolfin/intersection/Triangle_3_Tetrahedron_3_do_intersect_SCK.h dolfin/intersection/added_intersection_3.h dolfin/intersection/cgal_includes.h dolfin/quadrature/BarycenterQuadrature.cpp dolfin/quadrature/BarycenterQuadrature.h dolfin/swig/typemaps/std_set.i test/unit/intersection/python/IntersectionOperator.py test/unit/quadrature/cpp/BaryCenter.cpp test/unit/quadrature/python/BaryCenter.py Copyright: 2009, Andre Massing 2009-2011, Andre Massing 2010, Andre Massing 2011, Andre Massing License: LGPL-3+ Files: dolfin/fem/DirichletBC.cpp dolfin/fem/DirichletBC.h dolfin/fem/DofMap.cpp dolfin/fem/DofMap.h dolfin/fem/FiniteElement.h dolfin/fem/GenericDofMap.h dolfin/fem/LinearVariationalSolver.cpp dolfin/fem/LinearVariationalSolver.h dolfin/fem/NonlinearVariationalSolver.cpp dolfin/fem/NonlinearVariationalSolver.h dolfin/fem/VariationalProblem.cpp dolfin/fem/VariationalProblem.h dolfin/la/LinearSolver.h dolfin/la/Matrix.h dolfin/la/PETScBaseMatrix.cpp dolfin/la/PETScLinearOperator.cpp dolfin/la/PETScLinearOperator.h dolfin/la/STLMatrix.cpp dolfin/mesh/BoundaryComputation.cpp dolfin/mesh/BoundaryComputation.h dolfin/mesh/MeshValueCollection.h Copyright: 2004-2011, Anders Logg and Garth N. Wells 2005-2006, Anders Logg and Garth N. Wells 2005-2012, Anders Logg and Garth N. Wells 2006-20013 Anders Logg and Garth N. Wells 2006-2008, Anders Logg and Garth N. Wells 2006-2013, Anders Logg and Garth N. Wells 2007-2011, Anders Logg and Garth N. Wells 2007-2012, Anders Logg and Garth N. Wells 2007-2013, Anders Logg and Garth N. Wells 2008-2011, Anders Logg and Garth N. Wells 2008-2013, Anders Logg and Garth N. Wells 2010-2013, Anders Logg and Garth N. Wells 2011, Anders Logg and Garth N. Wells 2011-2012, Anders Logg and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/csg/2D/python/demo_csg_2D.py demo/undocumented/csg/3D/cpp/failing.cpp demo/undocumented/csg/3D/python/demo_csg_3D.py demo/undocumented/meshintersection/3D/cpp/main.cpp dolfin/generation/CSGCGALMeshGenerator2D.h dolfin/generation/CSGCGALMeshGenerator3D.cpp dolfin/generation/CSGCGALMeshGenerator3D.h dolfin/generation/CSGGeometries3D.cpp dolfin/generation/CSGGeometries3D.h dolfin/generation/GeometryToCGALConverter.cpp dolfin/generation/GeometryToCGALConverter.h dolfin/generation/Interval.h dolfin/generation/PolyhedronUtils.cpp dolfin/generation/PolyhedronUtils.h dolfin/generation/UnitCircle.h dolfin/generation/UnitCube.h dolfin/generation/UnitInterval.h dolfin/generation/UnitSquare.h Copyright: 2012, Benjamin Kehlet 2012-2013, Benjamin Kehlet License: LGPL-3+ Files: dolfin/la/PETScCuspFactory.cpp dolfin/la/PETScCuspFactory.h dolfin/plot/ExpressionWrapper.cpp dolfin/plot/ExpressionWrapper.h dolfin/plot/GenericVTKPlottable.h dolfin/plot/VTKPlottableDirichletBC.cpp dolfin/plot/VTKPlottableGenericFunction.cpp dolfin/plot/VTKPlottableGenericFunction.h dolfin/plot/VTKPlottableMesh.cpp dolfin/plot/VTKPlottableMesh.h dolfin/plot/VTKPlottableMeshFunction.cpp dolfin/plot/VTKPlottableMeshFunction.h dolfin/plot/VTKPlotter.cpp dolfin/plot/VTKPlotter.h dolfin/plot/VTKWindowOutputStage.cpp Copyright: 2011, Fredrik Valdmanis 2012, Fredrik Valdmanis License: LGPL-3+ Files: demo/undocumented/block-matrix/cpp/main.cpp demo/undocumented/block-matrix/python/demo_block-matrix.py demo/undocumented/sym-dirichlet-bc/python/demo_sym-dirichlet-bc.py demo/undocumented/sym-dirichlet-bc/python/dg-demo.py demo/undocumented/sym-dirichlet-bc/python/dg-speed-up-test.py demo/undocumented/sym-dirichlet-bc/python/speed-up-test.py demo/undocumented/trilinos/python/demo_trilinos.py dolfin/la/BlockMatrix.cpp dolfin/la/BlockMatrix.h dolfin/la/BlockVector.cpp dolfin/la/BlockVector.h site-packages/dolfin/mesh/boundarysubdomainfinder.py Copyright: 2008, Kent-Andre Mardal License: LGPL-3+ Files: demo/undocumented/elasticity/cpp/Elasticity.ufl dolfin/la/PETScKrylovSolver.cpp dolfin/la/PETScKrylovSolver.h dolfin/la/PETScUserPreconditioner.cpp dolfin/la/PETScUserPreconditioner.h dolfin/refinement/RivaraRefinement.cpp dolfin/refinement/RivaraRefinement.h dolfin/swig/la/pre.i utils/octave/pdemesh.m utils/octave/pdeplot.m utils/octave/pdesurf.m Copyright: 2004-2005, Johan Jansson 2005, Johan Jansson 2008, Johan Jansson 2009, Johan Jansson License: LGPL-3+ Files: demo/undocumented/meshfunction/cpp/main.cpp dolfin/io/SAX2AttributeParser.h dolfin/la/GenericLinearAlgebraFactory.h dolfin/la/GenericSparsityPattern.h dolfin/la/PETScFactory.cpp dolfin/la/PETScFactory.h dolfin/la/uBLASFactory.h dolfin/mesh/LocalMeshData.cpp dolfin/mesh/LocalMeshData.h dolfin/swig/exceptions.i dolfin/swig/typemaps/numpy.i Copyright: 2005-2006, Ola Skavhaug 2006, Ola Skavhaug 2007, Ola Skavhaug 2007-2009, Ola Skavhaug 2008, Ola Skavhaug 2009, Ola Skavhaug License: LGPL-3+ Files: demo/undocumented/plot-qt/cpp/BoundaryMeshFunction.cpp demo/undocumented/plot-qt/cpp/BoundaryMeshFunction.h demo/undocumented/plot-qt/cpp/CoordLabel.cpp demo/undocumented/plot-qt/cpp/CoordLabel.h demo/undocumented/plot-qt/cpp/PlotWidget.cpp demo/undocumented/plot-qt/cpp/PlotWidget.h demo/undocumented/plot-qt/cpp/Plotter.cpp demo/undocumented/plot-qt/cpp/Plotter.h demo/undocumented/plot-qt/cpp/main.cpp Copyright: 2012, Joachim Berdal Haga License: LGPL-3+ Files: dolfin/common/RangedIndexSet.h dolfin/plot/VTKPlottableCSGGeometry.cpp dolfin/plot/VTKPlottableCSGGeometry.h dolfin/plot/VTKPlottableDirichletBC.h dolfin/plot/VTKPlottableGenericFunction1D.cpp dolfin/plot/VTKPlottableGenericFunction1D.h dolfin/plot/VTKWindowOutputStage.h Copyright: 2012, Joachim B Haga License: LGPL-3+ Files: cmake/modules/FindCHOLMOD.cmake cmake/modules/FindCppUnit.cmake cmake/modules/FindMTL4.cmake cmake/modules/FindPETSc.cmake cmake/modules/FindParMETIS.cmake cmake/modules/FindSLEPc.cmake Copyright: 2010, Garth N. Wells, Anders Logg and Johannes Ring 2010-2011, Garth N. Wells, Anders Logg and Johannes Ring 2010-2012, Garth N. Wells, Anders Logg and Johannes Ring License: BSD-2-clause Files: dolfin/fem/SystemAssembler.cpp dolfin/fem/SystemAssembler.h dolfin/la/EpetraKrylovSolver.cpp dolfin/la/EpetraKrylovSolver.h dolfin/la/EpetraLUSolver.cpp dolfin/la/EpetraLUSolver.h Copyright: 2008-2009, Kent-Andre Mardal and Garth N. Wells 2008-2010, Kent-Andre Mardal and Garth N. Wells 2008-2011, Kent-Andre Mardal and Garth N. Wells 2008-2012, Kent-Andre Mardal and Garth N. Wells License: LGPL-3+ Files: dolfin/la/EpetraFactory.cpp dolfin/la/EpetraFactory.h dolfin/la/EpetraMatrix.cpp dolfin/la/EpetraMatrix.h dolfin/la/EpetraVector.cpp dolfin/la/EpetraVector.h Copyright: 2008, Martin Sandve Alnes, Kent-Andre Mardal and Johannes Ring License: LGPL-3+ Files: bench/fem/assembly/python/broken dolfin/la/STLFactory.cpp dolfin/la/STLFactory.h test/memory/test.py test/regression/test.py Copyright: 2007, Ilmar Wilbers 2008, Ilmar Wilbers License: LGPL-3+ Files: site-packages/dolfin/compilemodules/expressions.py site-packages/dolfin/compilemodules/subdomains.py site-packages/dolfin_utils/pjobs/pjobs.py site-packages/dolfin_utils/pjobs/torque.py site-packages/dolfin_utils/wrappers/capsules.py Copyright: 2008-2008, Martin Sandve Alnes 2008-2009, Martin Sandve Alnes 2009, Martin Sandve Alnes License: LGPL-3+ Files: demo/undocumented/ale/cpp/main.cpp demo/undocumented/ale/python/demo_ale.py dolfin/ale/ALE.cpp dolfin/ale/ALE.h dolfin/ale/ALEType.h Copyright: 2008, Solveig Bruvoll and Anders Logg 2008-2009, Solveig Bruvoll and Anders Logg 2008-2011, Solveig Bruvoll and Anders Logg License: LGPL-3+ Files: demo/pde/mixed-poisson/cpp/MixedPoisson.ufl demo/pde/mixed-poisson/cpp/main.cpp demo/undocumented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl demo/undocumented/auto-adaptive-poisson/cpp/main.cpp Copyright: 2006-2010, Anders Logg and Marie E. Rognes 2007-2011, Anders Logg and Marie E. Rognes 2010, Anders Logg and Marie E. Rognes 2010-2012, Anders Logg and Marie E. Rognes License: LGPL-3+ Files: demo/undocumented/curl-curl/cpp/CurrentDensity.ufl demo/undocumented/curl-curl/cpp/EddyCurrents.ufl demo/undocumented/curl-curl/cpp/main.cpp demo/undocumented/curl-curl/python/demo_curl-curl.py Copyright: 2009, Bartosz Sawicki License: LGPL-3+ Files: dolfin/io/HDF5Interface.cpp dolfin/io/HDF5Interface.h dolfin/io/XDMFFile.cpp dolfin/io/XDMFFile.h Copyright: 2012, Chris N. Richardson and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/waveguide/cpp/Forms.py demo/undocumented/waveguide/cpp/Forms.ufl demo/undocumented/waveguide/cpp/main.cpp demo/undocumented/waveguide/python/demo_waveguide.py Copyright: 2008, Evan Lezar License: LGPL-3+ Files: dolfin/refinement/BisectionRefinement.cpp dolfin/refinement/BisectionRefinement.h dolfin/refinement/LocalMeshCoarsening.cpp dolfin/refinement/LocalMeshCoarsening.h Copyright: 2006, Johan Hoffman License: LGPL-3+ Files: dolfin/la/PETScMatrix.cpp dolfin/la/PETScMatrix.h dolfin/la/PETScVector.cpp dolfin/la/PETScVector.h Copyright: 2004-2010, Johan Hoffman, Johan Jansson and Anders Logg 2004-2012, Johan Hoffman, Johan Jansson and Anders Logg License: LGPL-3+ Files: dolfin/io/XMLFile.cpp dolfin/io/XMLLocalMeshSAX.cpp dolfin/io/XMLLocalMeshSAX.h dolfin/mesh/MeshFunction.cpp Copyright: 2006-2011, Ola Skavhaug and Garth N. Wells 2008-2011, Ola Skavhaug and Garth N. Wells 2009-2011, Ola Skavhaug and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/poisson1D-in-2D/cpp/main.cpp demo/undocumented/poisson1D-in-2D/python/demo_poisson1D-in-2D.py test/unit/fem/python/manifolds.py Copyright: 2012, Imperial College London and others License: LGPL-3+ Files: dolfin/ale/MeshDisplacement.cpp dolfin/ale/MeshDisplacement.h test/unit/ale/python/HarmonicSmoothing.py Copyright: 2013, Jan Blechta License: LGPL-3+ Files: dolfin/common/MPI.cpp test/unit/io/cpp/XMLLocalMeshData.cpp test/unit/io/cpp/XMLMeshValueCollection.cpp Copyright: 2007, Magnus Vikstrøm License: LGPL-3+ Files: demo/undocumented/elastodynamics/cpp/DG0_eps_xx.ufl demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl demo/undocumented/elastodynamics/cpp/main.cpp Copyright: 2009, Mirko Maraldi and Garth N. Wells License: LGPL-3+ Files: dolfin/nls/PETScSNESSolver.cpp dolfin/nls/PETScSNESSolver.h test/unit/nls/python/PETScSNESSolver.py Copyright: 2012, Patrick E. Farrell License: LGPL-3+ Files: cmake/modules/FindBLAS.cmake cmake/modules/FindLAPACK.cmake Copyright: 2007-2009, Kitware, Inc License: BSD-3-clause Files: dolfin/io/pugiconfig.hpp dolfin/io/pugixml.hpp Copyright: 2003, Kristen Wegner (kristen@tima.net) 2006-2012, Arseny Kapoulkine 2006-2012, Arseny Kapoulkine (arseny.kapoulkine@gmail.com) License: Expat Files: dolfin/plot/plot.cpp dolfin/plot/plot.h Copyright: 2007-2012, Anders Logg and Fredrik Valdmanis License: LGPL-3+ Files: dolfin/log/Progress.h dolfin/log/log.h Copyright: 2003-2008, Anders Logg and Jim Tilander 2003-2013, Anders Logg and Jim Tilander License: LGPL-3+ Files: dolfin/adaptivity/adapt.cpp dolfin/adaptivity/adapt.h Copyright: 2010-2011, Anders Logg, Marie Rognes and Garth N. Wells License: LGPL-3+ Files: dolfin/fem/DofMapBuilder.cpp dolfin/fem/DofMapBuilder.h Copyright: 2008-2013, Anders Logg, Ola Skavhaug and Garth N. Wells License: LGPL-3+ Files: dolfin/graph/ZoltanPartition.cpp dolfin/graph/ZoltanPartition.h Copyright: 2013, Chris Richardson License: LGPL-3+ Files: dolfin/la/CholmodCholeskySolver.cpp dolfin/la/CholmodCholeskySolver.h Copyright: 2008, Dag Lindbo and Garth N. Wells 2008-2011, Dag Lindbo and Garth N. Wells License: LGPL-3+ Files: utils/matlab/xmlmatrix.m utils/matlab/xmlvector.m Copyright: 2004, Georgios Foufas License: LGPL-3+ Files: test/unit/book/python/chapter_1.py test/unit/book/python/original_tests/chapter_1.py.orig Copyright: 2011, Hans Petter Langtangen and Anders Logg License: LGPL-3+ Files: demo/undocumented/parameters/cpp/main.cpp demo/undocumented/parameters/python/demo_parameters.py Copyright: 2009, Johan Hake and Anders Logg License: LGPL-3+ Files: dolfin/io/GenericFile.cpp dolfin/io/GenericFile.h Copyright: 2002-2011, Johan Hoffman and Anders Logg 2003-2011, Johan Hoffman and Anders Logg License: LGPL-3+ Files: dolfin/io/File.cpp dolfin/io/File.h Copyright: 2002-2011, Johan Hoffman, Anders Logg and Garth N. Wells 2002-2012, Johan Hoffman, Anders Logg and Garth N. Wells License: LGPL-3+ Files: bench/plot.py dolfin/generation/CSGCGALMeshGenerator2D.cpp Copyright: 2010, Johannes Ring 2012, Johannes Ring License: LGPL-3+ Files: demo/la/eigenvalue/cpp/main.cpp demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.ufl Copyright: 2007, Kristian B. Oelgaard and Garth N. Wells 2007-2010, Kristian B. Oelgaard and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/meshintersection/2D/cpp/main.cpp demo/undocumented/meshintersection/2D/python/demo_meshintersection_2D.py Copyright: 2008, Kristoffer Selim License: LGPL-3+ Files: demo/undocumented/special-functions/python/demo_special_functions.py test/system/ufl-jit-assemble-chain/assembly_derivatives.py Copyright: 2010, Martin S. Alnaes 2011, Martin S. Alnaes License: LGPL-3+ Files: dolfin/graph/ParMETIS.cpp dolfin/graph/ParMETIS.h Copyright: 2008-2009, Niclas Jansson, Ola Skavhaug and Anders Logg 2008-2011, Niclas Jansson, Ola Skavhaug and Anders Logg License: LGPL-3+ Files: cmake/modules/FindAMD.cmake Copyright: 2010, Anders Logg License: BSD-2-clause Files: cmake/modules/FindCGAL.cmake Copyright: 2010-2011, Anders Logg, Johannes Ring and Garth N. Wells License: BSD-2-clause Files: cmake/modules/FindBLASHeader.cmake Copyright: 2010, Garth N. Wells License: BSD-2-clause Files: cmake/modules/FindSCOTCH.cmake Copyright: 2010-2011, Garth N. Wells, Johannes Ring and Anders Logg License: BSD-2-clause Files: cmake/modules/FindNumPy.cmake Copyright: 2010, Johannes Ring License: BSD-2-clause Files: cmake/modules/FindArmadillo.cmake Copyright: 2010-2011, Johannes Ring, Anders Logg and Garth N. Wells License: BSD-2-clause Files: cmake/modules/FindSphinx.cmake Copyright: 2011, Marie Rognes and Johannes Ring License: BSD-2-clause Files: cmake/modules/FindMPI.cmake Copyright: 2001-2009, Dave Partyka 2001-2011, Kitware, Inc 2010-2011, Todd Gamblin tgamblin@llnl.gov License: BSD-3-clause Files: site-packages/dolfin_utils/cppparser/CppHeaderParser.py Copyright: 2011, Jashua R. Cloutier License: BSD-3-clause Files: cmake/modules/FindGMP.cmake Copyright: 2006, Laurent Montel, License: BSD-3-clause Files: dolfin/io/pugixml.cpp Copyright: 2006-2012, Arseny Kapoulkine 2006-2012, Arseny Kapoulkine (arseny.kapoulkine@gmail.com) License: Expat Files: site-packages/dolfin_utils/ordereddict.py Copyright: 2009, Raymond Hettinger License: Expat Files: dolfin/generation/triangulate_polyhedron.h Copyright: 2010-2011, GeometryFactory Sarl (France) License: GPL-3+ Files: test/unit/meshconvert/python/test.py Copyright: 2012 License: LGPL-3+ Files: cmake/scripts/codesnippets.py Copyright: 2012, Johan Hake License: LGPL-3+ Files: test/unit/function/python/Function.py Copyright: 2011, Garth N. Wells License: LGPL-3+ Files: utils/matlab/plotslab.m Copyright: 2003, Johan Hoffman 2003-2005, Anders Logg License: LGPL-3+ Files: dolfin/generation/CSGMeshGenerator.h Copyright: 2012, Anders Logg (and others, add authors) License: LGPL-3+ Files: demo/undocumented/dg-poisson/cpp/main.cpp Copyright: 2006-2011, Anders Logg and Kristian B. Oelgaard License: LGPL-3+ Files: site-packages/dolfin_utils/documentation/generatecpprst.py Copyright: 2010, Anders Logg and Kristian Oelgaard License: LGPL-3+ Files: dolfin/ale/HarmonicSmoothing.cpp Copyright: 2008-2011, Anders Logg, 2013, Jan Blechta License: LGPL-3+ Files: dolfin/generation/CSGMeshGenerator.cpp Copyright: 2012, Anders Logg, Benjamin Kehlet, Johannes Ring License: LGPL-3+ Files: dolfin/la/LinearAlgebraObject.h Copyright: 2007-2012, Anders Logg, Garth N. Wells, Ola Skavhaug License: LGPL-3+ Files: site-packages/dolfin_utils/documentation/indextemplates.py Copyright: 2011, Anders Logg, Kristian Oelgaard, and Marie E. Rognes License: LGPL-3+ Files: test/unit/intersection/cpp/IntersectionOperator.cpp Copyright: 2011, André Massing License: LGPL-3+ Files: site-packages/dolfin_utils/meshconvert/abaqus.py Copyright: 2012, Arve Knudsen and Garth N/ Wells License: LGPL-3+ Files: dolfin/io/HDF5File.cpp Copyright: 2012, Chris N Richardson License: LGPL-3+ Files: dolfin/io/HDF5File.h Copyright: 2012, Chris N. Richardson License: LGPL-3+ Files: bench/fem/assembly/cpp/main.cpp Copyright: 2008-2010, Dag Lindbo, Anders Logg and Ilmar Wilbers License: LGPL-3+ Files: utils/matlab/xmlmesh.m Copyright: 2004, Erik Svensson License: LGPL-3+ Files: demo/undocumented/singular/python/demo_singular.py Copyright: 2012, Garth N. Wells License: LGPL-3+ Files: demo/pde/hyperelasticity/cpp/HyperElasticity.ufl Copyright: 2009-2010, Harish Narayanan and Garth N. Wells License: LGPL-3+ Files: demo/pde/hyperelasticity/cpp/main.cpp Copyright: 2009, Harish Narayanyan License: LGPL-3+ Files: site-packages/dolfin/common/plotting.py Copyright: 2008-2012, Joachim B. Haga and Fredrik Valdmanis License: LGPL-3+ Files: cmake/scripts/generate-swig-interface Copyright: 2012, Johan Hake License: LGPL-3+ Files: demo/pde/hyperelasticity/python/demo_hyperelasticity.py Copyright: 2008-2010, Johan Hake and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/elasticity/cpp/main.cpp Copyright: 2006-2009, Johan Jansson and Anders Logg License: LGPL-3+ Files: cmake/scripts/generate-swig-docstrings Copyright: 2010, Kristian B. Oelgaard License: LGPL-3+ Files: demo/undocumented/dg-poisson/cpp/Poisson.ufl Copyright: 2006-2007, Kristian B. Oelgaard and Anders Logg License: LGPL-3+ Files: demo/undocumented/dg-advection-diffusion/cpp/main.cpp Copyright: 2007-2011, Kristian B. Oelgaard, Anders Logg and Garth N. Wells License: LGPL-3+ Files: demo/pde/biharmonic/cpp/Biharmonic.ufl Copyright: 2009, Kristian B. Oelgaard, Garth N. Wells and Anders Logg License: LGPL-3+ Files: dolfin/common/MPI.h Copyright: 2007-2013, Magnus Vikstrøm and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/auto-adaptive-poisson/python/demo_auto-adaptive-poisson.py Copyright: 2011-2012, Marie E. Rognes and Anders Logg License: LGPL-3+ Files: demo/undocumented/overlapping-regions/python/demo_overlapping-regions.py Copyright: 2011-2013, Marie E. Rognes, Martin S. Alnaes License: LGPL-3+ Files: test/unit/math/python/test.py Copyright: 2011, Martin Alnaes License: LGPL-3+ Files: dolfin/mesh/MeshPartitioning.cpp Copyright: 2008-2012, Niclas Jansson, Ola Skavhaug, Anders Logg License: LGPL-3+ Files: dolfin/mesh/MeshPartitioning.h Copyright: 2008-2012, Niclas Jansson, Ola Skavhaug, Anders Logg and License: LGPL-3+ Files: dolfin/io/XMLParameters.h Copyright: 2011, Ola Skavhaug, Anders Logg and Garth N. Wells License: LGPL-3+ Files: demo/undocumented/adaptive-poisson/python/demo_adaptive-poisson.py Copyright: 2008, Rolv Erlend Bredesen License: LGPL-3+ Files: dolfin/io/base64.cpp Copyright: 2004-2008, Rene Nyffenegger License: This source code is provided 'as-is', without any express or implied warranty. In no event will the author be held liable for any damages arising from the use of this software. . Permission is granted to anyone to use this software for any purpose, including commercial applications, and to alter it and redistribute it freely, subject to the following restrictions: . 1. The origin of this source code must not be misrepresented; you must not claim that you wrote the original source code. If you use this source code in a product, an acknowledgment in the product documentation would be appreciated but is not required. . 2. Altered source versions must be plainly marked as such, and must not be misrepresented as being the original source code. . 3. This notice may not be removed or altered from any source distribution. License: BSD-2-clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: . 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. . THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. License: BSD-3-clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: . 1. Redistributions of source code must retain the copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. The name of the author may not be used to endorse or promote products derived from this software without specific prior written permission. . THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. License: GPL-3+ This software is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. . This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this software. If not, see . . On Debian systems the full text of the GNU General Public License, version 3 can be found in the file '/usr/share/common-licenses/LGPL-3'. License: LGPL-3+ This software is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. . This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details. . You should have received a copy of the GNU Lesser General Public License along with this software. If not, see . . On Debian systems the full text of the GNU Lesser General Public License, version 3 can be found in the file '/usr/share/common-licenses/LGPL-3'. License: Expat Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: . The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. . THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.