jalview (2.11.1.3+dfsg2-5) unstable; urgency=medium * Making the build reproducible thanks to Chris Lamb's patch about a timestamp issue (Closes: #985448) -- Pierre Gruet Thu, 18 Mar 2021 21:59:31 +0100 jalview (2.11.1.3+dfsg2-4) unstable; urgency=medium * Building the .build_properties file using dpkg-parsechangelog -STimestamp * Updating the description in d/control and the d/templates file for debconf after debian-l10n-english review (Closes: #983580) * Adding translations of debconf questionnaire in Brazilian Portuguese, Dutch, Galician, German, Portuguese (Closes: #983579, #984822, #984935, #984963) -- Pierre Gruet Thu, 11 Mar 2021 21:49:35 +0100 jalview (2.11.1.3+dfsg2-3) unstable; urgency=medium * Writing the .build_properties file needed in the jar * Updating the jalview wrapper to allow for either clicking on the icon, dropping a file onto it or right-clicking on a file in the file manager * Adding maintainer scripts and debconf questions to configure privacy options linked to automatic websites pings * Changing the date format in the .build_properties file * Packaging the example file so that it is not downloaded from the Internet at each startup -- Pierre Gruet Mon, 22 Feb 2021 17:54:06 +0100 jalview (2.11.1.3+dfsg2-2) unstable; urgency=high * Adding a memory limitation in the autopkgtest * Fixing a typo in d/tests/run-unit-test * Removing now useless d/TODO and d/dirs files -- Pierre Gruet Sun, 07 Feb 2021 22:06:13 +0100 jalview (2.11.1.3+dfsg2-1) unstable; urgency=medium [ Pierre Gruet ] * New upstream version (Closes: #849025) * New uploader (Closes: #897294) * Using version 4 in d/watch to remove files * Using secure URI in d/watch * Switching from cdbs to dh * Depending on debhelper-compat 13 * Making the build with Maven instead of upstream's gradle * Removing call to classgraph, not needed for a Debian run * Updating build-dependencies list and d/jalview.classpath * Modifying the jar launcher by setting properly the jar manifest * Updating Vcs-* and Homepage fields in d/control * Refreshing d/copyright * Bump Standards version to 4.5.1: - Providing a FreeDesktop entry instead of former menu entry - Rules-Requires-Root: no - Using the https form of the copyright-format URL * Updating manpage * Deactivating Google Analytics, using a non-packaged and improperly licensed software * Adding Mime types in d/jalview.desktop and d/jalview-mime.xml * Adding autopkgtests * Integrating the patch of upstream to control the way the web services are launched [ Steffen Moeller ] * Reintroduced debian/upstream/edam file * Created debian/upstream/metadata - references to papers - references to registries * Added prior forgotten PMID in metadata * d/u/metadata: syntax fixed(?) and URLs added * Added ref to conda, RRID->SciCrunch [ Andreas Tille ] * d/rules: enforce LC_ALL=C.UTF-8 to cope with UTF-8 characters -- Pierre Gruet Sat, 06 Feb 2021 23:04:36 +0100 jalview (2.7.dfsg-5) unstable; urgency=medium * Team upload. * Add debian/jalview.classpath and replace usage of JH_CLASSPATH_ARGS to avoid unwanted dependency on openjdk-7-jdk. (Closes: #814177) * Declare compliance with Debian Policy 3.9.7. * Vcs: Use cgit and https. * Fix Lintian warning dep5-copyright-license-name-not-unique. -- Markus Koschany Fri, 08 Apr 2016 23:36:00 +0200 jalview (2.7.dfsg-4) unstable; urgency=low * Team upload * Fixed a compilation error with Java 8 (Closes: #750746) * Removed the unused build dependencies on libgnujaf-java, libgnumail-java, libxalan2-java and libxerces2-java * Updated Standards-Version to 3.9.5 (no changes) * Moved the package to Git * Switch to debhelper level 9 * debian/copyright: Fixed a license short name -- Emmanuel Bourg Fri, 12 Sep 2014 14:56:20 +0200 jalview (2.7.dfsg-3) unstable; urgency=low * Team upload. [Emmanuel Bourg] * Added a patch to compile with Apache Mime4J 0.7.2 * debian/control: - Updated Standards-Version to 3.9.4 (no changes) - Runtime dependency on default-jre | java6-runtime (Closes: #727791) - Removed the duplicate build dependencies on javahelp2 and libaxis-java - Fixed a typo in the package description (Closes: #676623) * debian/copyright: Updated the Format URI * Updated debian/watch to catch the new releases * debian/rules: - Added a clean target to allow rebuilds - Added jsearch-indexer.jar to the classpath to fix the buildindices target [Niels Thykier] * Move package under under the Debian Java team with permission from Vincent. -- Emmanuel Bourg Mon, 04 Nov 2013 14:37:52 +0100 jalview (2.7.dfsg-2) unstable; urgency=low * Upload to unstable now that jmol is there too * Pull patches/newer-jmol-api.diff from upstream's git repository to make jalview work with jmol currently in unstable. -- Vincent Fourmond Mon, 07 Nov 2011 20:47:14 +0100 jalview (2.7.dfsg-1) experimental; urgency=low * Initial release (Closes: #507436) * Adding a debian/new-upstream script to repackage the original tarball, getting rid of the bundled precompiled JAR files (I love JAR files) * Using dh 7 and javahelper * Using jh_build for building * Uploading to experimental as it works only with the version of jmol in experimental -- Vincent Fourmond Wed, 19 Oct 2011 20:19:46 +0200