libbpp-phyl (2.1.0-1) unstable; urgency=low * New RateDistribution classes * New models for protein sequences (COaLA) * Support for gaps in parsimony score * Improved and extended support for BppO * Several bugs fixed and warnings removed -- Julien Dutheil Thu, 07 Mar 2013 15:58:00 +0100 libbpp-phyl (2.0.3-1) unstable; urgency=low * Reorganized model hierarchy * New pairwise models * Several bugs fixed -- Julien Dutheil Thu, 09 Feb 2013 16:00:00 +0100 libbpp-phyl (2.0.2-1) unstable; urgency=low * RFP: Bio++ -- The Bio++ bioinformatics libraries. (Closes: #616373). * Packages are now non-native. * Exact substitution mapping with detailled counts. * Backup system for ML estimation. -- Julien Dutheil Thu, 09 Jun 2011 11:00:00 +0100 libbpp-phyl (2.0.1) unstable; urgency=low * Fixed bug #27 * Improved tree drawing algorithms. -- Julien Dutheil Mon, 28 Feb 2011 09:00:00 +0100 libbpp-phyl (2.0.0) unstable; urgency=low * Better mixed models * Extended substitution mapping framework * More bug fixed, notably in simulation procedures * Topology comparison tools (ELW) * Improved graphic classes -- Julien Dutheil Mon, 07 Feb 2011 09:00:00 +0100 libbpp-phyl (1.9.0) unstable; urgency=low * Several bugs fixed and improvements, compilation with -Weffc++ * Codon models * Improved non-homogeneous classes * Improved tree drawing classes -- Julien Dutheil Thu, 25 Mar 2010 13:47:24 +0100 libbpp-phyl (1.8.0) unstable; urgency=low * Several buf fixed and improvements. * New support for Nexus tree files. * New syntax for model description using keyvals. -- Julien Dutheil Wed, 10 Jun 2009 11:28:58 +0100 libbpp-phyl (1.7.0) unstable; urgency=low * Several bug fixed and improvements... -- Julien Dutheil Thu, 11 Dec 2008 12:21:37 +0100 libbpp-phyl (1.6.0) unstable; urgency=low * New +F protein models + bugs fixed. -- Julien Dutheil Wed, 24 Sep 2008 14:07:26 +0200 libbpp-phyl (1.5.1) unstable; urgency=low * Initial Release. -- Julien Dutheil Mon, 21 Jul 2008 15:17:26 +0200