libbpp-seq (2.4.1-9) unstable; urgency=medium
* Fix watch file
-- Andreas Tille <tille@debian.org> Mon, 28 Nov 2022 18:00:15 +0100
libbpp-seq (2.4.1-8) unstable; urgency=medium
* Adapt symbols to gcc-12
Closes: #1012971
* Standards-Version: 4.6.1 (routine-update)
-- Andreas Tille <tille@debian.org> Sun, 24 Jul 2022 16:06:08 +0200
libbpp-seq (2.4.1-7) unstable; urgency=medium
* Really fix symbols file
-- Andreas Tille <tille@debian.org> Fri, 22 Oct 2021 07:26:58 +0200
libbpp-seq (2.4.1-6) unstable; urgency=medium
* Fix watchfile to detect new versions on github
* Standards-Version: 4.6.0 (routine-update)
* Fix ftbfs with gcc-11
Closes: #984094
-- Andreas Tille <tille@debian.org> Mon, 11 Oct 2021 10:35:48 +0200
libbpp-seq (2.4.1-5) unstable; urgency=medium
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
* Refer to specific version of license GPL-2+.
* Remove obsolete fields Contact, Name from debian/upstream/metadata (already
present in machine-readable debian/copyright).
* Update symbols for gcc-10
Closes: #957428
-- Andreas Tille <tille@debian.org> Thu, 23 Jul 2020 11:33:45 +0200
libbpp-seq (2.4.1-4) unstable; urgency=medium
* Rebuild for new version of gcc to fix symbols
Closes: #925736
* debhelper-compat 12
* Standards-Version: 4.4.0
* Set upstream metadata fields: Contact, Name.
-- Andreas Tille <tille@debian.org> Tue, 20 Aug 2019 16:07:58 +0200
libbpp-seq (2.4.1-3) unstable; urgency=medium
* Rebuild for new version of gcc to fix symbols
Closes: #923954
* Standards-Version: 4.3.0
-- Andreas Tille <tille@debian.org> Thu, 07 Mar 2019 18:56:16 +0100
libbpp-seq (2.4.1-2) unstable; urgency=medium
[ Jelmer Vernooij ]
* Use secure copyright file specification URI.
* Trim trailing whitespace.
[ Andreas Tille ]
* Fix symbols file
Closes: #915342
* Standards-Version: 4.2.1
* Remove trailing whitespace in debian/copyright
-- Andreas Tille <tille@debian.org> Mon, 03 Dec 2018 08:15:45 +0100
libbpp-seq (2.4.1-1) unstable; urgency=medium
[ Julien Dutheil ]
* New upstream version
Closes: #897784
[ Andreas Tille ]
* Standards-Version: 4.2.0
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Sun, 19 Aug 2018 11:45:47 +0200
libbpp-seq (2.4.0-2) unstable; urgency=medium
[ Julien Dutheil ]
* Provide symbols file only for amd64
[ Andreas Tille ]
* Provide full license text of CeCILL license
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Sun, 08 Apr 2018 08:04:59 +0200
libbpp-seq (2.4.0-1) unstable; urgency=medium
[ Julien Dutheil ]
* New upstream version
[ Andreas Tille ]
* Add symbols file
-- Andreas Tille <tille@debian.org> Sun, 25 Mar 2018 14:14:44 +0100
libbpp-seq (2.3.2-1) unstable; urgency=medium
[ Julien Dutheil ]
* New upstream version
[ Andreas Tille ]
* Standards-Version: 4.1.3
* cme fix dpkg-control
* debhelper 11
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 05 Feb 2018 17:36:38 +0200
libbpp-seq (2.3.1-8) unstable; urgency=medium
* Rebuild with gcc-7
* Standards-Version: 4.0.1
-- Andreas Tille <tille@debian.org> Wed, 23 Aug 2017 19:38:40 +0200
libbpp-seq (2.3.1-7) unstable; urgency=medium
[ Julien Dutheil ]
* Make tests work on 32 bits archs (enabled position independent code).
* Do not override debian default CXX flags.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Wed, 09 Aug 2017 15:54:52 +0200
libbpp-seq (2.3.1-6) unstable; urgency=medium
* Increased timeout threshold for Bowker test to pass on all arch.
* Removed postins scripts.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 17 Jul 2017 22:29:29 +0200
libbpp-seq (2.3.1-5) unstable; urgency=medium
[ Julien Dutheil ]
* Removed unused class VectorProbabilisticSiteContainer
[ Andreas Tille ]
* debhelper 10
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 13 Jul 2017 08:52:31 +0200
libbpp-seq (2.3.1-4) unstable; urgency=medium
* do not install broken header (Thanks for the patch to Steve Langasek
<steve.langasek@canonical.com>)
Closes: #866069
* d-shlibs (>= 0.80) contains needed override
-- Andreas Tille <tille@debian.org> Tue, 27 Jun 2017 08:35:18 +0200
libbpp-seq (2.3.1-3) unstable; urgency=medium
* cmake files belong to /usr/lib/$(DEB_HOST_MULTIARCH)
Closes: #865529
* hardening=+all
* do not ignore test failures
* Standards-Version: 4.0.0 (no changes needed)
-- Andreas Tille <tille@debian.org> Thu, 22 Jun 2017 21:52:59 +0200
libbpp-seq (2.3.1-2) unstable; urgency=medium
* Make sure cmake files will be installed also on i386
-- Andreas Tille <tille@debian.org> Thu, 22 Jun 2017 07:58:04 +0200
libbpp-seq (2.3.1-1) unstable; urgency=medium
* New upstream version
* d/watch: point to github
-- Andreas Tille <tille@debian.org> Tue, 13 Jun 2017 13:35:29 +0200
libbpp-seq (2.2.0-1) unstable; urgency=medium
* New upstream version
* Packaging moved to Git
* Better description
* Team maintenance in Debian Med team
* Add watch file
* debhelper 9
* DEP5
* short dh rules file using d-shlibs
* Library transition
Closes: #791099
-- Andreas Tille <tille@debian.org> Wed, 13 Apr 2016 15:17:21 +0200
libbpp-seq (2.1.0-1) unstable; urgency=low
* 'omics' tools now in bpp-seq-omics
* Extended BppO support
* StateProperties renamed to AlphabetIndex
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Tue, 05 Mar 2013 14:31:00 +0100
libbpp-seq (2.0.3-1) unstable; urgency=low
* Bugs fixed in maf parser + new iterators
* Added support for GFF
* Added support for FastQ
* Several bugs fixed
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 09 Feb 2012 14:00:00 +0100
libbpp-seq (2.0.2-1) unstable; urgency=low
* RFP: Bio++ -- The Bio++ bioinformatics libraries. (Closes: #616373).
* Packages are now non-native.
* Bugs fixed in maf parser.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 09 Jun 2011 11:00:00 +0100
libbpp-seq (2.0.1) unstable; urgency=low
* Fixed copyright and rules file.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 28 Feb 2011 09:00:00 +0100
libbpp-seq (2.0.0) unstable; urgency=low
* New source files organization.
* More NGS tools: sequence annotations, quality scores, file parsers, etc.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 07 Feb 2011 09:00:00 +0100
libbpp-seq (1.7.0) unstable; urgency=low
* Several bug fixed. Compilation with -Weffc++.
* New compressed sites container.
* Improved security by changing several pointers to references.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 25 Mar 2010 10:02:50 +0100
libbpp-seq (1.6.0) unstable; urgency=low
* New support for Nexus sequence files.
* Update for version 1.8 of Bio++.
-- Julien Dutheil <jdutheil@birc.au.dk> Wed, 10 Jun 2009 11:28:58 +0100
libbpp-seq (1.5.0) unstable; urgency=low
* Several bugs fixed, new Phred sequence format, speed improvements.
-- Julien Dutheil <jdutheil@birc.au.dk> Thu, 11 Dec 2008 12:21:37 +0100
libbpp-seq (1.4.1) unstable; urgency=low
* Initial Release.
-- Julien Dutheil <jdutheil@birc.au.dk> Mon, 21 Jul 2008 15:17:26 +0200