pairtools (1.1.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream version 1.1.0
  * Vendor "the" pipes module that was removed from Python3.13
    (Closes: #1081672)
  * Patch-out SyntaxWarnings (Closes: #1085765 )

 -- Alexandre Detiste <tchet@debian.org>  Mon, 18 Nov 2024 22:23:36 +0100

pairtools (1.0.3-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
    Repository-Browse.
  * No runtime dependency from cython
    Closes: #1057997

 -- Andreas Tille <tille@debian.org>  Mon, 11 Dec 2023 15:32:05 +0100

pairtools (1.0.2-2) unstable; urgency=medium

  * Team Upload.
  * Add B+R on "python3-pairtools (<< 1.0.2)" (Closes: #1027701)
  * B-D on python3-exceptiongroup at least temporarily to fix FTBFS

 -- Nilesh Patra <nilesh@debian.org>  Tue, 03 Jan 2023 00:30:28 +0530

pairtools (1.0.2-1) unstable; urgency=medium

  [ Nilesh Patra ]
  * Team Upload.
  * Add patch to fix FTBFS with numpy 1.24 (Closes: #1027232)
  * Bump Standards-Version to 4.6.2 (no changes needed)
  * New upstream version 1.0.2
  * Add patch for missing bam_dup1 declaration (Closes: #1027335)
  * Versioned Build dep against pysam
  * Build depend on python3-bioframe
  * Skip building docs, as manpages are not rendered the same
    way anymore
  * Get rid of B-D on sphinx-click
  * Move doc/examples/* installation to dedicated examples package
  * Add patch to not run coverage tests. It makes no sense to
    run them downstream.
  * Add patch to take python3 interpreter as different during
    testing, if CURPY var is set at runtime; helps run build time
    tests for all supported pyvers

  [ Andreas Tille]
  * Fix clean target
  * Build-Depends: python3-pandas, python3-pysam, python3-scipy, libhts-dev,
                   python3-yaml <!nocheck>

 -- Nilesh Patra <nilesh@debian.org>  Sun, 01 Jan 2023 17:51:23 +0530

pairtools (0.3.0-3.2) unstable; urgency=medium

  * Non-maintainer upload.
  * Use dh_numpy3, to generate the correct dependencies.

 -- Stefano Rivera <stefanor@debian.org>  Mon, 22 Nov 2021 16:26:45 -0400

pairtools (0.3.0-3.1) unstable; urgency=medium

  * Non-maintainer upload.
  * Patch: Support Python 3.10. (Closes: #1000337)

 -- Stefano Rivera <stefanor@debian.org>  Sun, 21 Nov 2021 16:13:08 -0400

pairtools (0.3.0-3) unstable; urgency=medium

  * Team upload.
  * Drop debug package
    Closes: #994318
  * Standards-Version: 4.6.0 (routine-update)
  * Apply multi-arch hints.
    + python3-pairtools-examples: Add Multi-Arch: same.
  * Install usr/bin/pairtools and mark other files not-installed

 -- Andreas Tille <tille@debian.org>  Wed, 22 Sep 2021 15:50:11 +0200

pairtools (0.3.0-2) unstable; urgency=medium

  * Team upload.

 -- Andreas Tille <tille@debian.org>  Wed, 15 Jul 2020 15:46:38 +0200

pairtools (0.3.0-1) unstable; urgency=medium

  * Initial release (Closes: #963052)

 -- Antoni Villalonga <antoni@friki.cat>  Thu, 18 Jun 2020 12:19:04 +0200