seqan-raptor (3.0.1+ds-7) experimental; urgency=medium
* d/control: Only build on 64-bit little-endian systems.
* d/tests/control: pin to the exact version of libseqan3-dev in
experimental. Note: Remove this version pinning when we upload to
unstable.
* d/seqan-raptor.install: destination path should not begin with a
"/".
* d/rules: fix "nocheck" build profile.
-- Michael R. Crusoe <crusoe@debian.org> Sat, 08 Feb 2025 12:08:45 +0100
seqan-raptor (3.0.1+ds-6) experimental; urgency=medium
* Team upload.
* d/control: Experimental rebuild using SeqAn 3.4.0-rc.3
* d/patches: Add patch for SeqAn 3.4.0-rc.3
* d/control: pkg-config has been superseded by pkgconf
* d/control: Standards-Version: 4.7.0
-- Enrico Seiler <enrico.seiler.debian@outlook.com> Wed, 05 Feb 2025 18:39:10 +0100
seqan-raptor (3.0.1+ds-5) unstable; urgency=medium
* d/tests/run-unit-test: also use -DRAPTOR_NATIVE_BUILD=OFF here
-- Michael R. Crusoe <crusoe@debian.org> Wed, 06 Sep 2023 15:04:40 +0200
seqan-raptor (3.0.1+ds-4) unstable; urgency=medium
* d/tests/*: added post-install running of the CLI tests againsted the
installed binary.
* d/rules: better clean up after ourselves.
* Update doxygen patch with upstream's help for better doxygen 1.9.8
compat. Closes: #1051156
* d/control: therefore xelatex is no longer needed to build the docs.
-- Michael R. Crusoe <crusoe@debian.org> Tue, 05 Sep 2023 13:59:30 +0200
seqan-raptor (3.0.1+ds-3) unstable; urgency=medium
* d/rules,d/tests/*: whoops, more work needed to build & run all the available
tests.
* Add "-O3" to the build-flags, to match "-DCMAKE_BUILD_TYPE=Release".
* d/tests/cwl: save results to $AUTOPKGTEST_ARTIFACTS, use
$AUTOPKGTEST_TMP for temporary files.
-- Michael R. Crusoe <crusoe@debian.org> Tue, 22 Aug 2023 13:14:50 +0200
seqan-raptor (3.0.1+ds-2) unstable; urgency=medium
* Fix docs only build
* d/clean: remove doc_build to fix "fails to build source after
successful build". Closes: #1048716
* r/rules: allow for existing "doc_build" directory. Fixes "Fails to
build binary packages again after successful build". Closes:
#1049768
* d/rules: export and install the CWL descriptions to
/usr/share/commonwl/raptor-*.cwl
* d/control: suggest the virtual package cwl-runner.
* d/clean: clean up the generated manpages and CWL descriptions.
* d/tests/: add CWL-based autopkgtest.
-- Michael R. Crusoe <crusoe@debian.org> Mon, 21 Aug 2023 14:17:58 +0200
seqan-raptor (3.0.1+ds-1) unstable; urgency=medium
* New upstream version
* Set upstream metadata fields: Bug-Submit.
* Removed 3 patches that are part of the new release. Refreshed the
remaining patches.
* d/control: add new build-dep: libyaml-cpp-dev
-- Michael R. Crusoe <crusoe@debian.org> Thu, 17 Aug 2023 16:04:15 +0200
seqan-raptor (3.0.0+ds-3) unstable; urgency=medium
* d/rules: set -DRAPTOR_STRIP_BINARY=OFF to prevent binary striping
-- Michael R. Crusoe <crusoe@debian.org> Wed, 19 Jul 2023 14:16:30 +0200
seqan-raptor (3.0.0+ds-2) unstable; urgency=medium
* d/patches/debian_seqan3: set patch to vendored seqan3 libraries.
* d/control: build-dep on seqan3 3.3.0 release candidate.
* d/patches/gcc13*: cherry-pick from upstream to fix gcc-13 build.
Closes: #1037856
-- Michael R. Crusoe <crusoe@debian.org> Fri, 14 Jul 2023 14:15:12 +0200
seqan-raptor (3.0.0+ds-1) unstable; urgency=medium
* d/watch: find complete source archives.
* New upstream version
* Standards-Version: 4.6.2 (routine-update)
* Refresh patches.
* d/control: bump minimum Seqan3 build-dep to 3.2.0+ds-7 to grab GCC
12.3+ fix.
* d/patches/fix_missing_lambda_capture.patch: Cherry-pick patch from upstream.
* d/rules: Update list of subcommands for exporting man pages.
* d/control: build-dep on cppreference-doc-en-html
* d/patches/debian_cppreference: use cppreference-doc-en-html to build
docs instead of downloading.
* d/patches/doxygen_update: adjust options for older Doxygen 1.9.4
* d/not-installed: acknowledge that chopper is not installed
* d/rules: only list missing files; don't error
* Fix auto_install for the docs package.
-- Michael R. Crusoe <crusoe@debian.org> Fri, 14 Jul 2023 13:55:36 +0200
seqan-raptor (2.0.0.0.git.fecfbca+ds-3) unstable; urgency=medium
* Append the CPPFLAGS, not overwrite it
* Don't compile with -march=native
* Revert: Upstream says doxygen docs aren't ready yet, so skip that for now.
* Also include man page for raptor build
* d/rules: build hardening
* d/control: remove first-person language from the descriptions
* d/control: -doc goes in the doc section
* d/patches/spelling: fix a typo
-- Michael R. Crusoe <crusoe@debian.org> Tue, 01 Nov 2022 13:00:02 +0100
seqan-raptor (2.0.0.0.git.fecfbca+ds-2) unstable; urgency=medium
* Generate and package the man pages.
* Upstream says doxygen docs aren't ready yet, so skip that for now.
* d/patches/privacy: don't phone home to check for a new version
* d/patches/debian_xxhash: get the libdir using pkg-config (Closes:
#1023176)
-- Michael R. Crusoe <crusoe@debian.org> Mon, 31 Oct 2022 11:43:26 +0100
seqan-raptor (2.0.0.0.git.fecfbca+ds-1) unstable; urgency=medium
* Initial release (Closes: #1022057)
-- Michael R. Crusoe <crusoe@debian.org> Wed, 19 Oct 2022 18:58:32 +0200