seqan-raptor (3.0.1+ds-5) unstable; urgency=medium * d/tests/run-unit-test: also use -DRAPTOR_NATIVE_BUILD=OFF here -- Michael R. Crusoe Wed, 06 Sep 2023 15:04:40 +0200 seqan-raptor (3.0.1+ds-4) unstable; urgency=medium * d/tests/*: added post-install running of the CLI tests againsted the installed binary. * d/rules: better clean up after ourselves. * Update doxygen patch with upstream's help for better doxygen 1.9.8 compat. Closes: #1051156 * d/control: therefore xelatex is no longer needed to build the docs. -- Michael R. Crusoe Tue, 05 Sep 2023 13:59:30 +0200 seqan-raptor (3.0.1+ds-3) unstable; urgency=medium * d/rules,d/tests/*: whoops, more work needed to build & run all the available tests. * Add "-O3" to the build-flags, to match "-DCMAKE_BUILD_TYPE=Release". * d/tests/cwl: save results to $AUTOPKGTEST_ARTIFACTS, use $AUTOPKGTEST_TMP for temporary files. -- Michael R. Crusoe Tue, 22 Aug 2023 13:14:50 +0200 seqan-raptor (3.0.1+ds-2) unstable; urgency=medium * Fix docs only build * d/clean: remove doc_build to fix "fails to build source after successful build". Closes: #1048716 * r/rules: allow for existing "doc_build" directory. Fixes "Fails to build binary packages again after successful build". Closes: #1049768 * d/rules: export and install the CWL descriptions to /usr/share/commonwl/raptor-*.cwl * d/control: suggest the virtual package cwl-runner. * d/clean: clean up the generated manpages and CWL descriptions. * d/tests/: add CWL-based autopkgtest. -- Michael R. Crusoe Mon, 21 Aug 2023 14:17:58 +0200 seqan-raptor (3.0.1+ds-1) unstable; urgency=medium * New upstream version * Set upstream metadata fields: Bug-Submit. * Removed 3 patches that are part of the new release. Refreshed the remaining patches. * d/control: add new build-dep: libyaml-cpp-dev -- Michael R. Crusoe Thu, 17 Aug 2023 16:04:15 +0200 seqan-raptor (3.0.0+ds-3) unstable; urgency=medium * d/rules: set -DRAPTOR_STRIP_BINARY=OFF to prevent binary striping -- Michael R. Crusoe Wed, 19 Jul 2023 14:16:30 +0200 seqan-raptor (3.0.0+ds-2) unstable; urgency=medium * d/patches/debian_seqan3: set patch to vendored seqan3 libraries. * d/control: build-dep on seqan3 3.3.0 release candidate. * d/patches/gcc13*: cherry-pick from upstream to fix gcc-13 build. Closes: #1037856 -- Michael R. Crusoe Fri, 14 Jul 2023 14:15:12 +0200 seqan-raptor (3.0.0+ds-1) unstable; urgency=medium * d/watch: find complete source archives. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Refresh patches. * d/control: bump minimum Seqan3 build-dep to 3.2.0+ds-7 to grab GCC 12.3+ fix. * d/patches/fix_missing_lambda_capture.patch: Cherry-pick patch from upstream. * d/rules: Update list of subcommands for exporting man pages. * d/control: build-dep on cppreference-doc-en-html * d/patches/debian_cppreference: use cppreference-doc-en-html to build docs instead of downloading. * d/patches/doxygen_update: adjust options for older Doxygen 1.9.4 * d/not-installed: acknowledge that chopper is not installed * d/rules: only list missing files; don't error * Fix auto_install for the docs package. -- Michael R. Crusoe Fri, 14 Jul 2023 13:55:36 +0200 seqan-raptor (2.0.0.0.git.fecfbca+ds-3) unstable; urgency=medium * Append the CPPFLAGS, not overwrite it * Don't compile with -march=native * Revert: Upstream says doxygen docs aren't ready yet, so skip that for now. * Also include man page for raptor build * d/rules: build hardening * d/control: remove first-person language from the descriptions * d/control: -doc goes in the doc section * d/patches/spelling: fix a typo -- Michael R. Crusoe Tue, 01 Nov 2022 13:00:02 +0100 seqan-raptor (2.0.0.0.git.fecfbca+ds-2) unstable; urgency=medium * Generate and package the man pages. * Upstream says doxygen docs aren't ready yet, so skip that for now. * d/patches/privacy: don't phone home to check for a new version * d/patches/debian_xxhash: get the libdir using pkg-config (Closes: #1023176) -- Michael R. Crusoe Mon, 31 Oct 2022 11:43:26 +0100 seqan-raptor (2.0.0.0.git.fecfbca+ds-1) unstable; urgency=medium * Initial release (Closes: #1022057) -- Michael R. Crusoe Wed, 19 Oct 2022 18:58:32 +0200