stacks (2.55+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.5.1 (routine-update)
-- Nilesh Patra <npatra974@gmail.com> Sun, 10 Jan 2021 17:37:28 +0530
stacks (2.54+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* debhelper-compat 13 (routine-update)
* Lintian warned: d/NEWS.Debian -> d/NEWS
-- Steffen Moeller <moeller@debian.org> Tue, 15 Sep 2020 03:16:02 +0200
stacks (2.53+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Updated bio.tools entry to lower-case
* Added dependency on littler to allow execution
of R script
-- Steffen Moeller <moeller@debian.org> Sun, 26 Apr 2020 01:41:49 +0200
stacks (2.52+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 12 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Use secure URI in Homepage field. (routine-update)
* Removed additional autogenerated files from upstream
-- Steffen Moeller <moeller@debian.org> Thu, 26 Mar 2020 02:25:20 +0100
stacks (2.41+dfsg-1) unstable; urgency=medium
* New upstream version
* debhelper 12
* Standards-Version: 4.4.0
* Secure URI in copyright format
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
* dh_auto_install --no-parallel
* Removed stacks-web package since the code for the web service
was removed from upstream source and the package has no active
users according to popcon anyway
* Python3 port of two simple scripts using 2to3
-- Andreas Tille <tille@debian.org> Fri, 12 Jul 2019 20:40:33 +0200
stacks (2.2+dfsg-1) unstable; urgency=medium
* New upstream version
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Fix path for Perl interpreter
-- Andreas Tille <tille@debian.org> Thu, 13 Sep 2018 09:51:56 +0200
stacks (2.0Beta9+dfsg-1) unstable; urgency=medium
* New upstream Beta release
-- Andreas Tille <tille@debian.org> Mon, 19 Mar 2018 12:10:23 +0100
stacks (2.0Beta8c+dfsg-1) unstable; urgency=medium
* New upstream version
* Remove code copy of htslib and use Debian packaged version of htslib
instead
* Standards-Version: 4.1.3
* debhelper 11
-- Andreas Tille <tille@debian.org> Sun, 18 Feb 2018 17:15:06 +0100
stacks (1.46-1) unstable; urgency=medium
* New upstream version
* Standards-Version: 4.0.0 (no changes needed)
* do not disable PIE
Closes: #865668
* d/rules: use DEB_SOURCE
-- Andreas Tille <tille@debian.org> Sat, 24 Jun 2017 08:20:24 +0200
stacks (1.44-2) unstable; urgency=medium
* d/watch: version=4
* debhelper 10
* stacks-web: Depends s/ | mysql-server/ | virtual-mysql-server/
Closes: #848464
-- Andreas Tille <tille@debian.org> Sat, 17 Dec 2016 17:34:44 +0100
stacks (1.44-1) unstable; urgency=medium
[ Kevin Murray ]
* Fix script executable paths to reflect debian install directory
[ Andreas Tille ]
* New upstream version
* stacks-web Depends: default-mysql-server | mysql-server
-- Andreas Tille <tille@debian.org> Sat, 22 Oct 2016 21:04:24 +0200
stacks (1.42-1) unstable; urgency=medium
* New upstream version
* hardening -pie
-- Andreas Tille <tille@debian.org> Sat, 13 Aug 2016 10:49:42 +0200
stacks (1.40-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* Build-Depends: samtools to ensure that package builds only on those
architectures where samtools is available
-- Andreas Tille <tille@debian.org> Thu, 19 May 2016 12:55:47 +0200
stacks (1.38-1) unstable; urgency=medium
* New upstream version
* debian/control: s/php5/php/
Closes: #821664
* Better hardening
-- Andreas Tille <tille@debian.org> Tue, 19 Apr 2016 10:45:21 +0200
stacks (1.37-1) unstable; urgency=medium
* New upstream version
* Moved from SVN to Git
* cme fix dpkg-control
-- Andreas Tille <tille@debian.org> Thu, 10 Mar 2016 23:31:22 +0100
stacks (1.35-1) unstable; urgency=medium
* New upstream version
-- Andreas Tille <tille@debian.org> Tue, 22 Sep 2015 21:05:58 +0200
stacks (1.34-1) unstable; urgency=medium
* New upstream version
-- Andreas Tille <tille@debian.org> Mon, 27 Jul 2015 17:58:43 +0200
stacks (1.32-1) unstable; urgency=medium
* New upstream version
-- Andreas Tille <tille@debian.org> Mon, 13 Jul 2015 19:52:06 +0200
stacks (1.25-1) unstable; urgency=medium
* Initial upload to Debian
Closes: #778832
-- Andreas Tille <tille@debian.org> Thu, 19 Feb 2015 18:31:48 +0100
stacks (1.25-0biolinux2) trusty; urgency=medium
* Correct silly cut-and-paste-o in control file
-- Tim Booth <tbooth@ceh.ac.uk> Thu, 19 Feb 2015 16:52:53 +0000
stacks (1.25-0biolinux1) trusty; urgency=medium
* New upstream
* Re-work stacks-setup-database to make databases named by project
* ...and to enable database deletion
* Improve the help you get from "stacks help"
-- Tim Booth <tbooth@ceh.ac.uk> Wed, 18 Feb 2015 11:34:22 +0000
stacks (1.24-0ubuntu4) trusty; urgency=medium
* Change web path back to /stacks rather than stacks-web,
just leaving the Apache config fragment with that name.
-- Tim Booth <tbooth@ceh.ac.uk> Thu, 29 Jan 2015 11:06:58 +0000
stacks (1.24-0ubuntu3) trusty; urgency=low
* Set PATH before calling any Stacks program in the wrapper
-- Tim Booth <tbooth@ceh.ac.uk> Fri, 23 Jan 2015 14:10:55 +0000
stacks (1.24-0ubuntu2) trusty; urgency=medium
* Initial release.
* Make stacks package plus stack-web for the web stuff
* Require sparsehash >2
-- Tim Booth <tbooth@ceh.ac.uk> Thu, 15 Jan 2015 18:50:45 +0000