Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: Theseus Upstream-Contact: Douglas Theobald Source: http://www.theseus3d.org/index.html Files: * Copyright: © 2003-2015, Douglas L. Theobald License: GPL-3+ Files: libdltmath/ncbi_math.* Copyright: © 1991, Gish, Kans, Ostell and Schuler License: GPL-2+ Files: libdltmath/myrandom.c Copyright: © 2002, Takuji Nishimura and Makoto Matsumoto License: GPL-2+ Files: qcprot.* Copyright: 2009-2015 Douglas L. Theobald , Department of Biochemistry Pu Liu , Johnson & Johnson Pharmaceutical Research and Development, L.L.C. License: BSD-3-clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: . * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. * Neither the name of the nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. . THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. Files: examples/* Copyright: PD License: PD ADVISORY NOTICE FOR USE OF THE PDB ARCHIVE . By using the materials available in this archive, the user agrees to abide by the following conditions: . * The archival data files in the PDB archive are made freely available to all users. Data files within the archive may be redistributed in original form without restriction. Redistribution of modified data files using the same file name as is on the FTP server is prohibited. The rules for file names are detailed at http://www.wwpdb.org/wwpdb_charter.html. . * Data files containing PDB content may incorporate the PDB 4-letter entry name (e.g. 1ABC) in standard PDB records only if they are exactly the same as what is residing in the PDB archive. This does not prevent databases from including PDB entry_id's as cross-references where it is clear that they refer to the PDB archive. PDB records refer to the standard PDB format. The distribution of modified PDB format data including the records: HEADER, CAVEAT, REVDAT, SPRSDE, DBREF, SEQADV, and MODRES are not allowed. . * The user assumes all responsibility for insuring that intellectual property claims associated with any data set deposited in the PDB archive are honored. It should be understood that the PDB data files do not contain any information on intellectual property claims with the exception in some cases of a reference for a patent involving the structure. . * Any opinion, findings, and conclusions expressed in the PDB archive by the authors/contributors do not necessarily reflect the views of the wwPDB. . * The data in the PDB archive are provided on an "as is" basis. The wwPDB nor its comprising institutions cannot be held liable to any party for direct, indirect, special, incidental, or consequential damages, including lost profits, arising from the use of PDB materials. . * Resources on this site are provided without warranty of any kind, either expressed or implied. This includes but is not limited to merchantability or fitness for a particular purpose. The institutions managing this site make no representation that these resources will not infringe any patent or other proprietary right. Comment: The files in examples/ are in the public domain, and can be copied and distributed with no restriction. It is scientific data from the Protein Data Bank (http://www.pdb.org) and the database ASTRAL (http://astral.berkeley.edu). Files: debian/* Copyright: © 2007-2008, Morten Kjeldgaard © 2008-2015, Andreas Tille License: GPL-3+ License: GPL-2+ THESEUS is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the complete text of the GNU General Public License version 2 can be found in `/usr/share/common-licenses/GPL-2'. License: GPL-3+ This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program. If not, see . . On a Debian system, the GNU GPL license is distributed in the file ‘/usr/share/common-licenses/GPL-3’.