Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Source: http://www.broadinstitute.org/igv/projects/downloads Files-Excluded: lib/batik* lib/commons* lib/guava* */htsjdk*.jar lib/jcommon* lib/jfreechart* */junit-*.jar lib/log4j-* */picard-*.jar */snappy-java-*.jar lib/swing-layout-* lib/jide-oss-* lib/gson* */ant.jar */fest-Assert*.jar test/lib/fest-util*.jar test/lib/fest-reflect*.jar Disclaimer: This package is not part of the Debian operating system. The igv source and binary Debian packages are part of the “non-free” area in our archive. The packages in this area are not part of the Debian system, although they have been configured for use with Debian. We nevertheless support the use of the igv source and binary Debian packages and provide infrastructure for non-free packages (such as our bug tracking system and mailing lists). Files: * Copyright: 2007-2018 Broad Institute License: Expat Files: lib/goby-io-igv*.jar Copyright: 2012-2014 Campagne Laboratory, Weill Cornell Medical College License: LGPL-3 Files: src/main/java/biz/* Copyright: 2003-2010 Christian dHeureuse, Inventec Informatik AG, Zurich, Switzerland License: Expat Files: src/main/java/com/* Copyright: 2010-2012 penSec.IT UG 2005 Ewan Mellor 2002 Vidar Holen 2002 Michal Ceresna 2001-2012 Steve Purcell License: BSD-3-clause Files: src/main/java/org/apache/* Copyright: 1999 The Apache Software Foundation License: Apache-1.1 Files: src/main/java/org/broad/igv/event/GenomeChangeEvent.java src/main/java/org/broad/igv/event/IGVEventBus.java src/main/java/org/broad/igv/event/IGVEventObserver.java src/main/java/org/broad/igv/event/ReferenceFrameEvent.java src/main/java/org/broad/igv/feature/basepair/* src/main/java/org/broad/igv/feature/bionano/* src/main/java/org/broad/igv/feature/genome/SequenceInterval.java src/main/java/org/broad/igv/maf/MAFtoSAM.java src/main/java/org/broad/igv/sam/InsertionManager.java src/main/java/org/broad/igv/sam/InsertionSelectionEvent.java src/main/java/org/broad/igv/sam/ReadStats.java src/main/java/org/broad/igv/sam/cram/* src/main/java/org/broad/igv/tools/RepeatMaskSplitter.java src/main/java/org/broad/igv/tools/PairedUtils.java src/main/java/org/broad/igv/tools/sort/BAMSorter.java src/main/java/org/broad/igv/tools/sort/Sorter.java src/main/java/org/broad/igv/tools/sort/SorterFactory.java src/main/java/org/broad/igv/track/Range.java src/main/java/org/broad/igv/track/ScalableTrack.java src/main/java/org/broad/igv/ui/util/ByteSubArray.java src/main/java/org/broad/igv/util/IntervalTree.java src/main/java/org/broad/igv/util/TutorialUtils.java src/test/java/org/broad/igv/sam/cram/CRAMReaderTest.java Copyright: 2015-2016 University of California San Diego License: Expat Files: src/main/java/org/broad/igv/feature/SpliceJunctionFeature.java src/main/java/org/broad/igv/sam/SpliceJunctionHelper.java src/main/java/org/broad/igv/sam/SpliceJunctionTrack.java Copyright: 2007-2015 Fred Hutchinson Cancer Research Center and Broad Institute License: Expat Files: src/main/java/org/broad/igv/goby/* src/test/java/org/broad/igv/goby/* Copyright: 2007-2015 Institute for Computational Biomedicine License: Expat Files: src/main/java/org/broad/igv/renderer/SpliceJunctionRenderer.java Copyright: 2013 F. 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